Protein–RNA interactions for Protein: P32497

NIP1, Eukaryotic translation initiation factor 3 subunit C, yeastyeast

Known RBP Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NIP1P32497 YOR329W-AYOR329W-A 210 nt0.06□□□□□ -2.4
NIP1P32497 snR39BsnR39B 96 nt0.05□□□□□ -2.4
NIP1P32497 snR128snR128 126 nt0.04□□□□□ -2.4
NIP1P32497 SPG3YDR504C 384 nt0.03□□□□□ -2.4
NIP1P32497 JLP2YMR132C 627 nt0.03□□□□□ -2.4
NIP1P32497 YHL015W-AYHL015W-A 84 nt0.02□□□□□ -2.41
NIP1P32497 YMR046W-AYMR046W-A 129 nt0.02□□□□□ -2.41
NIP1P32497 SOV1YMR066W 2697 nt0□□□□□ -2.41
NIP1P32497 YJL150WYJL150W 303 nt-0.05□□□□□ -2.42
NIP1P32497 RPM2YML091C 3609 nt-0.06□□□□□ -2.42
NIP1P32497 tQ(UUG)QtQ(UUG)Q 76 nt-0.06□□□□□ -2.42
NIP1P32497 YOR102WYOR102W 351 nt-0.06□□□□□ -2.42
NIP1P32497 YGR146C-AYGR146C-A 162 nt-0.08□□□□□ -2.42
NIP1P32497 snR48snR48 113 nt-0.08□□□□□ -2.42
NIP1P32497 tM(CAU)Q1tM(CAU)Q1 76 nt-0.09□□□□□ -2.42
NIP1P32497 tL(UAA)QtL(UAA)Q 85 nt-0.1□□□□□ -2.43
NIP1P32497 YNL067W-BYNL067W-B 141 nt-0.1□□□□□ -2.43
NIP1P32497 YGR164WYGR164W 336 nt-0.11□□□□□ -2.43
NIP1P32497 YJL077W-AYJL077W-A 87 nt-0.11□□□□□ -2.43
NIP1P32497 snR69snR69 101 nt-0.13□□□□□ -2.43
NIP1P32497 YDL007C-AYDL007C-A 258 nt-0.14□□□□□ -2.43
NIP1P32497 YNL198CYNL198C 303 nt-0.14□□□□□ -2.43
NIP1P32497 TFB5YDR079C-A 219 nt-0.17□□□□□ -2.44
NIP1P32497 PMP2YEL017C-A 132 nt-0.18□□□□□ -2.44
NIP1P32497 YBL053WYBL053W 375 nt-0.19□□□□□ -2.44
NIP1P32497 YNL205CYNL205C 423 nt-0.22□□□□□ -2.44
NIP1P32497 RDS3YPR094W 324 nt-0.22□□□□□ -2.44
NIP1P32497 SBH2YER019C-A 267 nt-0.23□□□□□ -2.45
NIP1P32497 YPL060C-AYPL060C-A 3315 nt-0.25□□□□□ -2.45
NIP1P32497 YGR151CYGR151C 336 nt-0.25□□□□□ -2.45
NIP1P32497 YLR466C-BYLR466C-B 117 nt-0.25□□□□□ -2.45
NIP1P32497 YBR178WYBR178W 375 nt-0.26□□□□□ -2.45
NIP1P32497 SEC10YLR166C 2616 nt-0.29□□□□□ -2.46
NIP1P32497 tD(GUC)QtD(GUC)Q 75 nt-0.29□□□□□ -2.46
NIP1P32497 snR50snR50 90 nt-0.29□□□□□ -2.46
NIP1P32497 PAU9YBL108C-A 129 nt-0.3□□□□□ -2.46
NIP1P32497 YIL071W-AYIL071W-A 477 nt-0.31□□□□□ -2.46
NIP1P32497 YNL338WYNL338W 159 nt-0.31□□□□□ -2.46
NIP1P32497 YER090C-AYER090C-A 90 nt-0.34□□□□□ -2.46
NIP1P32497 YLR286W-AYLR286W-A 135 nt-0.35□□□□□ -2.47
NIP1P32497 SOM1YEL059C-A 225 nt-0.37□□□□□ -2.47
NIP1P32497 YML100W-AYML100W-A 174 nt-0.37□□□□□ -2.47
NIP1P32497 YNL266WYNL266W 420 nt-0.37□□□□□ -2.47
NIP1P32497 YDL159C-BYDL159C-B 177 nt-0.38□□□□□ -2.47
NIP1P32497 YNL337WYNL337W 255 nt-0.39□□□□□ -2.47
NIP1P32497 YBR196C-AYBR196C-A 150 nt-0.41□□□□□ -2.48
NIP1P32497 YJL113WYJL113W 4647 nt-0.47□□□□□ -2.49
NIP1P32497 YCR095W-AYCR095W-A 159 nt-0.49□□□□□ -2.49
NIP1P32497 YLR299C-AYLR299C-A 93 nt-0.49□□□□□ -2.49
NIP1P32497 snR67snR67 82 nt-0.5□□□□□ -2.49
NIP1P32497 URB1YKL014C 5295 nt-0.5□□□□□ -2.49
NIP1P32497 tA(UGC)QtA(UGC)Q 76 nt-0.52□□□□□ -2.49
NIP1P32497 YCL001W-BYCL001W-B 255 nt-0.57□□□□□ -2.5
NIP1P32497 Q0032Q0032 291 nt-0.6□□□□□ -2.51
NIP1P32497 YGL007C-AYGL007C-A 87 nt-0.65□□□□□ -2.51
NIP1P32497 YML054C-AYML054C-A 159 nt-0.69□□□□□ -2.52
NIP1P32497 YHR180C-BYHR180C-B 105 nt-0.71□□□□□ -2.52
NIP1P32497 SKI7YOR076C 2244 nt-0.72□□□□□ -2.52
NIP1P32497 YHL009W-BYHL009W-B 5409 nt-0.74□□□□□ -2.53
NIP1P32497 YOL083C-AYOL083C-A 141 nt-0.77□□□□□ -2.53
NIP1P32497 tT(UGU)G1tT(UGU)G1 72 nt-0.78□□□□□ -2.53
NIP1P32497 tT(UGU)G2tT(UGU)G2 72 nt-0.78□□□□□ -2.53
NIP1P32497 tT(UGU)PtT(UGU)P 72 nt-0.78□□□□□ -2.53
NIP1P32497 snR33snR33 183 nt-0.79□□□□□ -2.54
NIP1P32497 snR161snR161 161 nt-0.8□□□□□ -2.54
NIP1P32497 YLR294CYLR294C 330 nt-0.84□□□□□ -2.54
NIP1P32497 YOR225WYOR225W 330 nt-0.89□□□□□ -2.55
NIP1P32497 YBL071C-BYBL071C-B 99 nt-0.92□□□□□ -2.56
NIP1P32497 YNR077CYNR077C 255 nt-0.96□□□□□ -2.56
NIP1P32497 RPL41AYDL184C 78 nt-0.97□□□□□ -2.56
NIP1P32497 YAL037C-AYAL037C-A 93 nt-0.97□□□□□ -2.56
NIP1P32497 YOL164W-AYOL164W-A 183 nt-0.98□□□□□ -2.57
NIP1P32497 YBL100W-CYBL100W-C 120 nt-1.01□□□□□ -2.57
NIP1P32497 snR47snR47 99 nt-1.02□□□□□ -2.57
NIP1P32497 YBR296C-AYBR296C-A 120 nt-1.02□□□□□ -2.57
NIP1P32497 snR81snR81 201 nt-1.03□□□□□ -2.57
NIP1P32497 YBR109W-AYBR109W-A 225 nt-1.04□□□□□ -2.58
NIP1P32497 tP(UGG)QtP(UGG)Q 72 nt-1.05□□□□□ -2.58
NIP1P32497 YNL170WYNL170W 396 nt-1.05□□□□□ -2.58
NIP1P32497 YBR223W-AYBR223W-A 120 nt-1.05□□□□□ -2.58
NIP1P32497 YKL106C-AYKL106C-A 120 nt-1.09□□□□□ -2.58
NIP1P32497 YOR376W-AYOR376W-A 156 nt-1.09□□□□□ -2.58
NIP1P32497 YNL103W-AYNL103W-A 90 nt-1.1□□□□□ -2.59
NIP1P32497 YGL041C-BYGL041C-B 183 nt-1.11□□□□□ -2.59
NIP1P32497 YGR240C-AYGR240C-A 201 nt-1.11□□□□□ -2.59
NIP1P32497 snR61snR61 90 nt-1.2□□□□□ -2.6
NIP1P32497 snR38snR38 95 nt-1.2□□□□□ -2.6
NIP1P32497 ATP8Q0080 147 nt-1.22□□□□□ -2.6
NIP1P32497 snR77snR77 88 nt-1.24□□□□□ -2.61
NIP1P32497 tS(GCU)Q1tS(GCU)Q1 86 nt-1.24□□□□□ -2.61
NIP1P32497 CDC65tQ(CUG)M 72 nt-1.29□□□□□ -2.62
NIP1P32497 YOR316C-AYOR316C-A 210 nt-1.29□□□□□ -2.62
NIP1P32497 YKL225WYKL225W 348 nt-1.37□□□□□ -2.63
NIP1P32497 YDR034C-AYDR034C-A 177 nt-1.39□□□□□ -2.63
NIP1P32497 YMR315W-AYMR315W-A 108 nt-1.43□□□□□ -2.64
NIP1P32497 Q0092Q0092 141 nt-1.45□□□□□ -2.64
NIP1P32497 snR62snR62 100 nt-1.49□□□□□ -2.65
NIP1P32497 tY(GUA)QtY(GUA)Q 84 nt-1.51□□□□□ -2.65
NIP1P32497 Q0143Q0143 153 nt-1.57□□□□□ -2.66
NIP1P32497 YDL114W-AYDL114W-A 114 nt-1.69□□□□□ -2.68
Retrieved 100 of 7,029 protein–RNA pairs in 243 ms