Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.92■□□□□ 0.62
PTPN6P29350 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.92■□□□□ 0.62
PTPN6P29350 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN6P29350 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
PTPN6P29350 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN6P29350 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN6P29350 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN6P29350 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.91■□□□□ 0.62
PTPN6P29350 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
PTPN6P29350 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN6P29350 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN6P29350 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN6P29350 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN6P29350 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN6P29350 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN6P29350 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN6P29350 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
PTPN6P29350 GPX1P1-201ENST00000388829 606 ntBASIC18.91■□□□□ 0.62
PTPN6P29350 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.91■□□□□ 0.62
PTPN6P29350 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.91■□□□□ 0.62
PTPN6P29350 PGM5P4-201ENST00000421970 445 ntBASIC18.91■□□□□ 0.62
PTPN6P29350 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.91■□□□□ 0.62
PTPN6P29350 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.91■□□□□ 0.62
PTPN6P29350 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.91■□□□□ 0.62
PTPN6P29350 AL162412.1-201ENST00000567129 965 ntBASIC18.91■□□□□ 0.62
PTPN6P29350 AC133552.2-202ENST00000575694 574 ntBASIC18.91■□□□□ 0.62
PTPN6P29350 AC104771.1-201ENST00000603335 964 ntBASIC18.91■□□□□ 0.62
PTPN6P29350 AC016405.3-201ENST00000607710 860 ntBASIC18.91■□□□□ 0.62
PTPN6P29350 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.91■□□□□ 0.62
PTPN6P29350 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.91■□□□□ 0.62
PTPN6P29350 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN6P29350 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
PTPN6P29350 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN6P29350 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN6P29350 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.9■□□□□ 0.62
PTPN6P29350 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.9■□□□□ 0.62
PTPN6P29350 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTPN6P29350 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PTPN6P29350 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTPN6P29350 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTPN6P29350 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTPN6P29350 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.9■□□□□ 0.62
PTPN6P29350 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.9■□□□□ 0.62
PTPN6P29350 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.9■□□□□ 0.62
PTPN6P29350 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
PTPN6P29350 AC083906.2-201ENST00000511578 360 ntBASIC18.9■□□□□ 0.62
PTPN6P29350 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.9■□□□□ 0.62
PTPN6P29350 AL109923.1-201ENST00000618799 583 ntBASIC18.9■□□□□ 0.62
PTPN6P29350 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.9■□□□□ 0.62
PTPN6P29350 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTPN6P29350 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTPN6P29350 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTPN6P29350 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.9■□□□□ 0.62
PTPN6P29350 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.9■□□□□ 0.62
PTPN6P29350 AC005332.7-201ENST00000614046 2005 ntBASIC18.9■□□□□ 0.62
PTPN6P29350 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
PTPN6P29350 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTPN6P29350 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PTPN6P29350 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTPN6P29350 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTPN6P29350 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTPN6P29350 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTPN6P29350 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTPN6P29350 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PTPN6P29350 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTPN6P29350 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTPN6P29350 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTPN6P29350 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.89■□□□□ 0.61
PTPN6P29350 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PTPN6P29350 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
PTPN6P29350 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.89■□□□□ 0.61
PTPN6P29350 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTPN6P29350 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.89■□□□□ 0.61
PTPN6P29350 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN6P29350 BX323043.1-201ENST00000641006 1765 ntBASIC18.88■□□□□ 0.61
PTPN6P29350 AC018445.3-201ENST00000624177 1945 ntBASIC18.88■□□□□ 0.61
PTPN6P29350 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.88■□□□□ 0.61
PTPN6P29350 AC093484.2-201ENST00000580996 2166 ntBASIC18.88■□□□□ 0.61
PTPN6P29350 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
PTPN6P29350 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.88■□□□□ 0.61
PTPN6P29350 AF201337.1-201ENST00000520239 748 ntBASIC18.88■□□□□ 0.61
PTPN6P29350 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.88■□□□□ 0.61
PTPN6P29350 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN6P29350 AC069236.1-201ENST00000604339 616 ntBASIC18.88■□□□□ 0.61
PTPN6P29350 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
PTPN6P29350 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PTPN6P29350 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN6P29350 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
PTPN6P29350 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
PTPN6P29350 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.88■□□□□ 0.61
PTPN6P29350 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
PTPN6P29350 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN6P29350 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN6P29350 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN6P29350 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN6P29350 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
PTPN6P29350 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
PTPN6P29350 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN6P29350 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN6P29350 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms