Protein–RNA interactions for Protein: P28708

PRR1, Serine/threonine-protein kinase PRR1, yeastyeast

Predictions only

Length 518 aa.

Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRR1P28708 YGR151CYGR151C 336 nt0.36□□□□□ -2.35
PRR1P28708 YBL100W-BYBL100W-B 5313 nt0.35□□□□□ -2.35
PRR1P28708 YDR210WYDR210W 228 nt0.35□□□□□ -2.35
PRR1P28708 YNL337WYNL337W 255 nt0.34□□□□□ -2.36
PRR1P28708 YNL338WYNL338W 159 nt0.33□□□□□ -2.36
PRR1P28708 YHL015W-AYHL015W-A 84 nt0.32□□□□□ -2.36
PRR1P28708 CSE1YGL238W 2883 nt0.31□□□□□ -2.36
PRR1P28708 YOR102WYOR102W 351 nt0.31□□□□□ -2.36
PRR1P28708 YPL060C-AYPL060C-A 3315 nt0.3□□□□□ -2.36
PRR1P28708 tM(CAU)Q2tM(CAU)Q2 78 nt0.29□□□□□ -2.36
PRR1P28708 YDL007C-AYDL007C-A 258 nt0.28□□□□□ -2.36
PRR1P28708 BIR1YJR089W 2865 nt0.28□□□□□ -2.36
PRR1P28708 YGL007C-AYGL007C-A 87 nt0.27□□□□□ -2.37
PRR1P28708 YOR225WYOR225W 330 nt0.26□□□□□ -2.37
PRR1P28708 YER078W-AYER078W-A 165 nt0.25□□□□□ -2.37
PRR1P28708 YBR099CYBR099C 384 nt0.24□□□□□ -2.37
PRR1P28708 YNL067W-BYNL067W-B 141 nt0.22□□□□□ -2.37
PRR1P28708 SOV1YMR066W 2697 nt0.22□□□□□ -2.37
PRR1P28708 Q0032Q0032 291 nt0.21□□□□□ -2.38
PRR1P28708 YOL013W-AYOL013W-A 192 nt0.21□□□□□ -2.38
PRR1P28708 YGR146C-AYGR146C-A 162 nt0.2□□□□□ -2.38
PRR1P28708 EST1YLR233C 2100 nt0.19□□□□□ -2.38
PRR1P28708 YOR186C-AYOR186C-A 210 nt0.18□□□□□ -2.38
PRR1P28708 THO2YNL139C 4794 nt0.14□□□□□ -2.39
PRR1P28708 RPM2YML091C 3609 nt0.14□□□□□ -2.39
PRR1P28708 snR69snR69 101 nt0.14□□□□□ -2.39
PRR1P28708 YIL071W-AYIL071W-A 477 nt0.13□□□□□ -2.39
PRR1P28708 YLR294CYLR294C 330 nt0.13□□□□□ -2.39
PRR1P28708 PMP2YEL017C-A 132 nt0.11□□□□□ -2.39
PRR1P28708 YGR164WYGR164W 336 nt0.08□□□□□ -2.4
PRR1P28708 YNL205CYNL205C 423 nt0.08□□□□□ -2.4
PRR1P28708 SEC10YLR166C 2616 nt0.04□□□□□ -2.4
PRR1P28708 SOM1YEL059C-A 225 nt0.03□□□□□ -2.4
PRR1P28708 YJL077W-AYJL077W-A 87 nt0.03□□□□□ -2.4
PRR1P28708 YBR178WYBR178W 375 nt0.03□□□□□ -2.4
PRR1P28708 snR45snR45 172 nt0.03□□□□□ -2.4
PRR1P28708 YCL001W-BYCL001W-B 255 nt0.03□□□□□ -2.4
PRR1P28708 tQ(UUG)QtQ(UUG)Q 76 nt0.02□□□□□ -2.41
PRR1P28708 YNL266WYNL266W 420 nt0.01□□□□□ -2.41
PRR1P28708 snR128snR128 126 nt0.01□□□□□ -2.41
PRR1P28708 RDS3YPR094W 324 nt0.01□□□□□ -2.41
PRR1P28708 tD(GUC)QtD(GUC)Q 75 nt0□□□□□ -2.41
PRR1P28708 snR50snR50 90 nt-0.02□□□□□ -2.41
PRR1P28708 YCR095W-AYCR095W-A 159 nt-0.04□□□□□ -2.42
PRR1P28708 YER090C-AYER090C-A 90 nt-0.07□□□□□ -2.42
PRR1P28708 YLR286W-AYLR286W-A 135 nt-0.07□□□□□ -2.42
PRR1P28708 YBR196C-AYBR196C-A 150 nt-0.08□□□□□ -2.42
PRR1P28708 YML100W-AYML100W-A 174 nt-0.09□□□□□ -2.42
PRR1P28708 YDL159C-BYDL159C-B 177 nt-0.1□□□□□ -2.43
PRR1P28708 YNL170WYNL170W 396 nt-0.16□□□□□ -2.44
PRR1P28708 YLR299C-AYLR299C-A 93 nt-0.17□□□□□ -2.44
PRR1P28708 ATP8Q0080 147 nt-0.2□□□□□ -2.44
PRR1P28708 SBH2YER019C-A 267 nt-0.21□□□□□ -2.44
PRR1P28708 TFB5YDR079C-A 219 nt-0.25□□□□□ -2.45
PRR1P28708 snR67snR67 82 nt-0.26□□□□□ -2.45
PRR1P28708 YML054C-AYML054C-A 159 nt-0.26□□□□□ -2.45
PRR1P28708 PAU9YBL108C-A 129 nt-0.27□□□□□ -2.45
PRR1P28708 YBL071C-BYBL071C-B 99 nt-0.29□□□□□ -2.46
PRR1P28708 YOL083C-AYOL083C-A 141 nt-0.29□□□□□ -2.46
PRR1P28708 SKI7YOR076C 2244 nt-0.29□□□□□ -2.46
PRR1P28708 tA(UGC)QtA(UGC)Q 76 nt-0.31□□□□□ -2.46
PRR1P28708 snR81snR81 201 nt-0.32□□□□□ -2.46
PRR1P28708 Q0092Q0092 141 nt-0.32□□□□□ -2.46
PRR1P28708 YNL103W-AYNL103W-A 90 nt-0.33□□□□□ -2.46
PRR1P28708 YJL113WYJL113W 4647 nt-0.36□□□□□ -2.47
PRR1P28708 YAL037C-AYAL037C-A 93 nt-0.37□□□□□ -2.47
PRR1P28708 YHR180C-BYHR180C-B 105 nt-0.39□□□□□ -2.47
PRR1P28708 YOL164W-AYOL164W-A 183 nt-0.42□□□□□ -2.48
PRR1P28708 YGL041C-BYGL041C-B 183 nt-0.44□□□□□ -2.48
PRR1P28708 snR61snR61 90 nt-0.46□□□□□ -2.48
PRR1P28708 YBR109W-AYBR109W-A 225 nt-0.46□□□□□ -2.48
PRR1P28708 URB1YKL014C 5295 nt-0.51□□□□□ -2.49
PRR1P28708 snR38snR38 95 nt-0.51□□□□□ -2.49
PRR1P28708 snR47snR47 99 nt-0.51□□□□□ -2.49
PRR1P28708 Q0143Q0143 153 nt-0.53□□□□□ -2.49
PRR1P28708 YGR240C-AYGR240C-A 201 nt-0.54□□□□□ -2.5
PRR1P28708 RPL41AYDL184C 78 nt-0.56□□□□□ -2.5
PRR1P28708 YBR296C-AYBR296C-A 120 nt-0.56□□□□□ -2.5
PRR1P28708 tS(GCU)Q1tS(GCU)Q1 86 nt-0.58□□□□□ -2.5
PRR1P28708 snR161snR161 161 nt-0.6□□□□□ -2.51
PRR1P28708 YBL100W-CYBL100W-C 120 nt-0.61□□□□□ -2.51
PRR1P28708 YOR376W-AYOR376W-A 156 nt-0.61□□□□□ -2.51
PRR1P28708 YHL009W-BYHL009W-B 5409 nt-0.63□□□□□ -2.51
PRR1P28708 snR33snR33 183 nt-0.68□□□□□ -2.52
PRR1P28708 YKL106C-AYKL106C-A 120 nt-0.7□□□□□ -2.52
PRR1P28708 snR62snR62 100 nt-0.72□□□□□ -2.52
PRR1P28708 YDR034C-AYDR034C-A 177 nt-0.72□□□□□ -2.52
PRR1P28708 snR85snR85 171 nt-0.74□□□□□ -2.53
PRR1P28708 YKL225WYKL225W 348 nt-0.74□□□□□ -2.53
PRR1P28708 YBL109WYBL109W 336 nt-0.78□□□□□ -2.53
PRR1P28708 YMR326CYMR326C 309 nt-0.8□□□□□ -2.54
PRR1P28708 YHR217CYHR217C 462 nt-0.81□□□□□ -2.54
PRR1P28708 tT(UGU)G1tT(UGU)G1 72 nt-0.82□□□□□ -2.54
PRR1P28708 tT(UGU)G2tT(UGU)G2 72 nt-0.82□□□□□ -2.54
PRR1P28708 tT(UGU)PtT(UGU)P 72 nt-0.82□□□□□ -2.54
PRR1P28708 YOR316C-AYOR316C-A 210 nt-0.82□□□□□ -2.54
PRR1P28708 snR77snR77 88 nt-0.83□□□□□ -2.54
PRR1P28708 tP(UGG)QtP(UGG)Q 72 nt-0.88□□□□□ -2.55
PRR1P28708 CDC65tQ(CUG)M 72 nt-0.92□□□□□ -2.56
PRR1P28708 YDL159W-AYDL159W-A 132 nt-0.96□□□□□ -2.56
Retrieved 100 of 7,029 protein–RNA pairs in 68.8 ms