Protein–RNA interactions for Protein: P25441

RPC53, DNA-directed RNA polymerase III subunit RPC4, yeast

Predictions only

Length 422 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
RPC53	P25441	YOR170W	YOR170W	306 nt		-0.26	□□□□□ -2.45
RPC53	P25441	tM(CAU)Q2	tM(CAU)Q2	78 nt		-0.28	□□□□□ -2.45
RPC53	P25441	SBH2	YER019C-A	267 nt		-0.29	□□□□□ -2.46
RPC53	P25441	YJL077W-A	YJL077W-A	87 nt		-0.3	□□□□□ -2.46
RPC53	P25441	snR39B	snR39B	96 nt		-0.38	□□□□□ -2.47
RPC53	P25441	YLR342W-A	YLR342W-A	174 nt		-0.39	□□□□□ -2.47
RPC53	P25441	snR80	snR80	171 nt		-0.4	□□□□□ -2.47
RPC53	P25441	YGR146C-A	YGR146C-A	162 nt		-0.4	□□□□□ -2.47
RPC53	P25441	SEC10	YLR166C	2616 nt		-0.41	□□□□□ -2.47
RPC53	P25441	snR52	snR52	92 nt		-0.43	□□□□□ -2.48
RPC53	P25441	YIL071W-A	YIL071W-A	477 nt		-0.45	□□□□□ -2.48
RPC53	P25441	tQ(UUG)Q	tQ(UUG)Q	76 nt		-0.46	□□□□□ -2.48
RPC53	P25441	YOR329W-A	YOR329W-A	210 nt		-0.46	□□□□□ -2.48
RPC53	P25441	YML100W-A	YML100W-A	174 nt		-0.47	□□□□□ -2.48
RPC53	P25441	YJL113W	YJL113W	4647 nt		-0.49	□□□□□ -2.49
RPC53	P25441	YDL007C-A	YDL007C-A	258 nt		-0.49	□□□□□ -2.49
RPC53	P25441	snR69	snR69	101 nt		-0.49	□□□□□ -2.49
RPC53	P25441	URB1	YKL014C	5295 nt		-0.5	□□□□□ -2.49
RPC53	P25441	snR48	snR48	113 nt		-0.51	□□□□□ -2.49
RPC53	P25441	YNL067W-B	YNL067W-B	141 nt		-0.52	□□□□□ -2.49
RPC53	P25441	tA(UGC)Q	tA(UGC)Q	76 nt		-0.53	□□□□□ -2.49
RPC53	P25441	YDR406W-A	YDR406W-A	246 nt		-0.55	□□□□□ -2.5
RPC53	P25441	PMP2	YEL017C-A	132 nt		-0.55	□□□□□ -2.5
RPC53	P25441	PAU9	YBL108C-A	129 nt		-0.55	□□□□□ -2.5
RPC53	P25441	RDS3	YPR094W	324 nt		-0.57	□□□□□ -2.5
RPC53	P25441	tT(UGU)G1	tT(UGU)G1	72 nt		-0.61	□□□□□ -2.51
RPC53	P25441	tT(UGU)G2	tT(UGU)G2	72 nt		-0.61	□□□□□ -2.51
RPC53	P25441	tT(UGU)P	tT(UGU)P	72 nt		-0.61	□□□□□ -2.51
RPC53	P25441	YER090C-A	YER090C-A	90 nt		-0.63	□□□□□ -2.51
RPC53	P25441	YHL015W-A	YHL015W-A	84 nt		-0.63	□□□□□ -2.51
RPC53	P25441	YNL205C	YNL205C	423 nt		-0.64	□□□□□ -2.51
RPC53	P25441	snR50	snR50	90 nt		-0.65	□□□□□ -2.51
RPC53	P25441	YNL266W	YNL266W	420 nt		-0.66	□□□□□ -2.52
RPC53	P25441	YOR102W	YOR102W	351 nt		-0.66	□□□□□ -2.52
RPC53	P25441	snR161	snR161	161 nt		-0.67	□□□□□ -2.52
RPC53	P25441	tL(UAA)Q	tL(UAA)Q	85 nt		-0.69	□□□□□ -2.52
RPC53	P25441	YHL009W-B	YHL009W-B	5409 nt		-0.7	□□□□□ -2.52
RPC53	P25441	tD(GUC)Q	tD(GUC)Q	75 nt		-0.7	□□□□□ -2.52
RPC53	P25441	YMR046W-A	YMR046W-A	129 nt		-0.71	□□□□□ -2.52
RPC53	P25441	JLP2	YMR132C	627 nt		-0.72	□□□□□ -2.52
RPC53	P25441	snR33	snR33	183 nt		-0.73	□□□□□ -2.53
RPC53	P25441	YLR286W-A	YLR286W-A	135 nt		-0.78	□□□□□ -2.53
RPC53	P25441	YBR178W	YBR178W	375 nt		-0.78	□□□□□ -2.53
RPC53	P25441	snR67	snR67	82 nt		-0.79	□□□□□ -2.54
RPC53	P25441	YBR223W-A	YBR223W-A	120 nt		-0.82	□□□□□ -2.54
RPC53	P25441	YDL159C-B	YDL159C-B	177 nt		-0.83	□□□□□ -2.54
RPC53	P25441	SPG3	YDR504C	384 nt		-0.83	□□□□□ -2.54
RPC53	P25441	YNR077C	YNR077C	255 nt		-0.83	□□□□□ -2.54
RPC53	P25441	YJL150W	YJL150W	303 nt		-0.86	□□□□□ -2.55
RPC53	P25441	SKI7	YOR076C	2244 nt		-0.87	□□□□□ -2.55
RPC53	P25441	YNL198C	YNL198C	303 nt		-0.88	□□□□□ -2.55
RPC53	P25441	tM(CAU)Q1	tM(CAU)Q1	76 nt		-0.89	□□□□□ -2.55
RPC53	P25441	YLR299C-A	YLR299C-A	93 nt		-0.95	□□□□□ -2.56
RPC53	P25441	YBR196C-A	YBR196C-A	150 nt		-0.95	□□□□□ -2.56
RPC53	P25441	SOM1	YEL059C-A	225 nt		-1.04	□□□□□ -2.58
RPC53	P25441	tP(UGG)Q	tP(UGG)Q	72 nt		-1.04	□□□□□ -2.58
RPC53	P25441	YML054C-A	YML054C-A	159 nt		-1.04	□□□□□ -2.58
RPC53	P25441	YBL053W	YBL053W	375 nt		-1.07	□□□□□ -2.58
RPC53	P25441	YCR095W-A	YCR095W-A	159 nt		-1.08	□□□□□ -2.58
RPC53	P25441	YHR180C-B	YHR180C-B	105 nt		-1.16	□□□□□ -2.6
RPC53	P25441	CDC65	tQ(CUG)M	72 nt		-1.21	□□□□□ -2.6
RPC53	P25441	YGR240C-A	YGR240C-A	201 nt		-1.21	□□□□□ -2.6
RPC53	P25441	YLR466C-B	YLR466C-B	117 nt		-1.21	□□□□□ -2.6
RPC53	P25441	YOR376W-A	YOR376W-A	156 nt		-1.23	□□□□□ -2.61
RPC53	P25441	snR77	snR77	88 nt		-1.24	□□□□□ -2.61
RPC53	P25441	YGR151C	YGR151C	336 nt		-1.24	□□□□□ -2.61
RPC53	P25441	YKL106C-A	YKL106C-A	120 nt		-1.35	□□□□□ -2.63
RPC53	P25441	YMR315W-A	YMR315W-A	108 nt		-1.36	□□□□□ -2.63
RPC53	P25441	YOR316C-A	YOR316C-A	210 nt		-1.37	□□□□□ -2.63
RPC53	P25441	RPL41A	YDL184C	78 nt		-1.39	□□□□□ -2.63
RPC53	P25441	tY(GUA)Q	tY(GUA)Q	84 nt		-1.39	□□□□□ -2.63
RPC53	P25441	YNL338W	YNL338W	159 nt		-1.39	□□□□□ -2.63
RPC53	P25441	YBR109W-A	YBR109W-A	225 nt		-1.39	□□□□□ -2.63
RPC53	P25441	YBR296C-A	YBR296C-A	120 nt		-1.39	□□□□□ -2.63
RPC53	P25441	snR81	snR81	201 nt		-1.4	□□□□□ -2.63
RPC53	P25441	YOL083C-A	YOL083C-A	141 nt		-1.4	□□□□□ -2.63
RPC53	P25441	YBL071C-B	YBL071C-B	99 nt		-1.43	□□□□□ -2.64
RPC53	P25441	YNL337W	YNL337W	255 nt		-1.43	□□□□□ -2.64
RPC53	P25441	YCL001W-B	YCL001W-B	255 nt		-1.43	□□□□□ -2.64
RPC53	P25441	YOL164W-A	YOL164W-A	183 nt		-1.49	□□□□□ -2.65
RPC53	P25441	snR38	snR38	95 nt		-1.49	□□□□□ -2.65
RPC53	P25441	YAL037C-A	YAL037C-A	93 nt		-1.52	□□□□□ -2.65
RPC53	P25441	Q0032	Q0032	291 nt		-1.54	□□□□□ -2.66
RPC53	P25441	snR47	snR47	99 nt		-1.56	□□□□□ -2.66
RPC53	P25441	YBL100W-C	YBL100W-C	120 nt		-1.6	□□□□□ -2.67
RPC53	P25441	YOR309C	YOR309C	381 nt		-1.67	□□□□□ -2.68
RPC53	P25441	YGL007C-A	YGL007C-A	87 nt		-1.71	□□□□□ -2.68
RPC53	P25441	YBR126W-B	YBR126W-B	144 nt		-1.76	□□□□□ -2.69
RPC53	P25441	tS(GCU)Q1	tS(GCU)Q1	86 nt		-1.77	□□□□□ -2.69
RPC53	P25441	YKL225W	YKL225W	348 nt		-1.78	□□□□□ -2.69
RPC53	P25441	snR6	snR6	112 nt		-1.82	□□□□□ -2.7
RPC53	P25441	YOL166W-A	YOL166W-A	156 nt		-1.85	□□□□□ -2.71
RPC53	P25441	YGL041C-B	YGL041C-B	183 nt		-1.86	□□□□□ -2.71
RPC53	P25441	YDR543C	YDR543C	300 nt		-1.89	□□□□□ -2.71
RPC53	P25441	YOR335W-A	YOR335W-A	81 nt		-1.89	□□□□□ -2.71
RPC53	P25441	YDL114W-A	YDL114W-A	114 nt		-1.91	□□□□□ -2.72
RPC53	P25441	YNL103W-A	YNL103W-A	90 nt		-1.92	□□□□□ -2.72
RPC53	P25441	snR61	snR61	90 nt		-1.93	□□□□□ -2.72
RPC53	P25441	RPL41B	YDL133C-A	78 nt		-1.94	□□□□□ -2.72
RPC53	P25441	tV(UAC)Q	tV(UAC)Q	76 nt		-1.94	□□□□□ -2.72

Retrieved 100 of 7,029 protein–RNA pairs in 13.8 ms