Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH3P22223 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDH3P22223 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.47■□□□□ 0.71
CDH3P22223 UNC93B4-201ENST00000505679 747 ntBASIC19.47■□□□□ 0.71
CDH3P22223 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.47■□□□□ 0.71
CDH3P22223 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CDH3P22223 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.47■□□□□ 0.71
CDH3P22223 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.47■□□□□ 0.71
CDH3P22223 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH3P22223 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH3P22223 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH3P22223 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH3P22223 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH3P22223 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
CDH3P22223 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDH3P22223 AC006128.1-201ENST00000624704 1661 ntBASIC19.46■□□□□ 0.71
CDH3P22223 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH3P22223 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH3P22223 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH3P22223 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH3P22223 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH3P22223 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH3P22223 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH3P22223 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDH3P22223 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CDH3P22223 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDH3P22223 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.46■□□□□ 0.71
CDH3P22223 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CDH3P22223 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH3P22223 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH3P22223 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.46■□□□□ 0.71
CDH3P22223 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CDH3P22223 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.46■□□□□ 0.71
CDH3P22223 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH3P22223 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH3P22223 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH3P22223 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDH3P22223 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH3P22223 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.46■□□□□ 0.71
CDH3P22223 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CDH3P22223 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.46■□□□□ 0.71
CDH3P22223 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH3P22223 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.46■□□□□ 0.71
CDH3P22223 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CDH3P22223 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.46■□□□□ 0.71
CDH3P22223 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.46■□□□□ 0.71
CDH3P22223 FP700111.2-201ENST00000619190 1892 ntBASIC19.45■□□□□ 0.7
CDH3P22223 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CDH3P22223 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDH3P22223 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.45■□□□□ 0.7
CDH3P22223 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CDH3P22223 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CDH3P22223 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.45■□□□□ 0.7
CDH3P22223 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDH3P22223 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CDH3P22223 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.45■□□□□ 0.7
CDH3P22223 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.45■□□□□ 0.7
CDH3P22223 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CDH3P22223 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CDH3P22223 AL390719.1-204ENST00000412397 1219 ntBASIC19.45■□□□□ 0.7
CDH3P22223 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CDH3P22223 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDH3P22223 AC128676.1-201ENST00000454392 318 ntBASIC19.45■□□□□ 0.7
CDH3P22223 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.45■□□□□ 0.7
CDH3P22223 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.45■□□□□ 0.7
CDH3P22223 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.45■□□□□ 0.7
CDH3P22223 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.45■□□□□ 0.7
CDH3P22223 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.45■□□□□ 0.7
CDH3P22223 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.45■□□□□ 0.7
CDH3P22223 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.45■□□□□ 0.7
CDH3P22223 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDH3P22223 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDH3P22223 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDH3P22223 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CDH3P22223 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDH3P22223 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDH3P22223 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDH3P22223 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDH3P22223 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDH3P22223 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.44■□□□□ 0.7
CDH3P22223 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.44■□□□□ 0.7
CDH3P22223 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDH3P22223 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.44■□□□□ 0.7
CDH3P22223 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
CDH3P22223 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDH3P22223 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDH3P22223 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDH3P22223 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDH3P22223 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDH3P22223 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDH3P22223 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CDH3P22223 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.44■□□□□ 0.7
CDH3P22223 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDH3P22223 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.44■□□□□ 0.7
CDH3P22223 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDH3P22223 AC008403.3-201ENST00000598924 454 ntBASIC19.44■□□□□ 0.7
CDH3P22223 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CDH3P22223 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDH3P22223 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.44■□□□□ 0.7
CDH3P22223 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms