Protein–RNA interactions for Protein: P20486

CKS1, Cyclin-dependent kinases regulatory subunit, yeastyeast

Known RBP Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CKS1P20486 YBR131C-AYBR131C-A 90 nt-1.04□□□□□ -2.58
CKS1P20486 snR49snR49 165 nt-1.04□□□□□ -2.58
CKS1P20486 tM(CAU)Q2tM(CAU)Q2 78 nt-1.05□□□□□ -2.58
CKS1P20486 YFL019CYFL019C 354 nt-1.06□□□□□ -2.58
CKS1P20486 snR50snR50 90 nt-1.06□□□□□ -2.58
CKS1P20486 YGR146C-AYGR146C-A 162 nt-1.07□□□□□ -2.58
CKS1P20486 RDS3YPR094W 324 nt-1.07□□□□□ -2.58
CKS1P20486 PMP2YEL017C-A 132 nt-1.08□□□□□ -2.58
CKS1P20486 GIM4YEL003W 336 nt-1.1□□□□□ -2.59
CKS1P20486 tT(UGU)G1tT(UGU)G1 72 nt-1.12□□□□□ -2.59
CKS1P20486 tT(UGU)G2tT(UGU)G2 72 nt-1.12□□□□□ -2.59
CKS1P20486 tT(UGU)PtT(UGU)P 72 nt-1.12□□□□□ -2.59
CKS1P20486 snR39BsnR39B 96 nt-1.12□□□□□ -2.59
CKS1P20486 YNL097C-BYNL097C-B 123 nt-1.13□□□□□ -2.59
CKS1P20486 Q0144Q0144 330 nt-1.14□□□□□ -2.59
CKS1P20486 snR55snR55 98 nt-1.16□□□□□ -2.6
CKS1P20486 JLP2YMR132C 627 nt-1.16□□□□□ -2.6
CKS1P20486 YOR329W-AYOR329W-A 210 nt-1.16□□□□□ -2.6
CKS1P20486 tD(GUC)QtD(GUC)Q 75 nt-1.24□□□□□ -2.61
CKS1P20486 snR67snR67 82 nt-1.26□□□□□ -2.61
CKS1P20486 snR161snR161 161 nt-1.27□□□□□ -2.61
CKS1P20486 SKI7YOR076C 2244 nt-1.28□□□□□ -2.61
CKS1P20486 YLR286W-AYLR286W-A 135 nt-1.28□□□□□ -2.61
CKS1P20486 YOR302WYOR302W 78 nt-1.29□□□□□ -2.62
CKS1P20486 YOL155W-AYOL155W-A 135 nt-1.3□□□□□ -2.62
CKS1P20486 YPL152W-AYPL152W-A 99 nt-1.32□□□□□ -2.62
CKS1P20486 YBR178WYBR178W 375 nt-1.33□□□□□ -2.62
CKS1P20486 snR48snR48 113 nt-1.33□□□□□ -2.62
CKS1P20486 YNL205CYNL205C 423 nt-1.34□□□□□ -2.62
CKS1P20486 snR65snR65 100 nt-1.35□□□□□ -2.63
CKS1P20486 tP(UGG)QtP(UGG)Q 72 nt-1.36□□□□□ -2.63
CKS1P20486 YDL159C-BYDL159C-B 177 nt-1.37□□□□□ -2.63
CKS1P20486 tL(UAA)QtL(UAA)Q 85 nt-1.41□□□□□ -2.64
CKS1P20486 YGL188C-AYGL188C-A 141 nt-1.47□□□□□ -2.64
CKS1P20486 YOR102WYOR102W 351 nt-1.48□□□□□ -2.65
CKS1P20486 YHR175W-AYHR175W-A 150 nt-1.49□□□□□ -2.65
CKS1P20486 YML054C-AYML054C-A 159 nt-1.49□□□□□ -2.65
CKS1P20486 snR52snR52 92 nt-1.5□□□□□ -2.65
CKS1P20486 YLR342W-AYLR342W-A 174 nt-1.52□□□□□ -2.65
CKS1P20486 YBR223W-AYBR223W-A 120 nt-1.54□□□□□ -2.66
CKS1P20486 YLR299C-AYLR299C-A 93 nt-1.55□□□□□ -2.66
CKS1P20486 tR(ACG)Q2tR(ACG)Q2 74 nt-1.58□□□□□ -2.66
CKS1P20486 YHL015W-AYHL015W-A 84 nt-1.59□□□□□ -2.66
CKS1P20486 snR80snR80 171 nt-1.61□□□□□ -2.67
CKS1P20486 CDC65tQ(CUG)M 72 nt-1.61□□□□□ -2.67
CKS1P20486 YOR231C-AYOR231C-A 201 nt-1.61□□□□□ -2.67
CKS1P20486 YBR196C-AYBR196C-A 150 nt-1.61□□□□□ -2.67
CKS1P20486 snR56snR56 88 nt-1.62□□□□□ -2.67
CKS1P20486 snR77snR77 88 nt-1.65□□□□□ -2.67
CKS1P20486 YGR240C-AYGR240C-A 201 nt-1.66□□□□□ -2.68
CKS1P20486 YNL198CYNL198C 303 nt-1.75□□□□□ -2.69
CKS1P20486 YOR376W-AYOR376W-A 156 nt-1.76□□□□□ -2.69
CKS1P20486 tY(GUA)QtY(GUA)Q 84 nt-1.78□□□□□ -2.69
CKS1P20486 YDR524W-CYDR524W-C 90 nt-1.82□□□□□ -2.7
CKS1P20486 YHR180C-BYHR180C-B 105 nt-1.83□□□□□ -2.7
CKS1P20486 YMR315W-AYMR315W-A 108 nt-1.85□□□□□ -2.71
CKS1P20486 snR81snR81 201 nt-1.87□□□□□ -2.71
CKS1P20486 YDR406W-AYDR406W-A 246 nt-1.87□□□□□ -2.71
CKS1P20486 YJL150WYJL150W 303 nt-1.87□□□□□ -2.71
CKS1P20486 YBL053WYBL053W 375 nt-1.88□□□□□ -2.71
CKS1P20486 SOM1YEL059C-A 225 nt-1.89□□□□□ -2.71
CKS1P20486 YOR316C-AYOR316C-A 210 nt-1.96□□□□□ -2.72
CKS1P20486 YNR077CYNR077C 255 nt-1.98□□□□□ -2.73
CKS1P20486 YKL106C-AYKL106C-A 120 nt-1.99□□□□□ -2.73
CKS1P20486 YCR095W-AYCR095W-A 159 nt-2□□□□□ -2.73
CKS1P20486 YBR109W-AYBR109W-A 225 nt-2.07□□□□□ -2.74
CKS1P20486 YBR296C-AYBR296C-A 120 nt-2.12□□□□□ -2.75
CKS1P20486 RPL41AYDL184C 78 nt-2.14□□□□□ -2.75
CKS1P20486 YMR046W-AYMR046W-A 129 nt-2.19□□□□□ -2.76
CKS1P20486 snR38snR38 95 nt-2.19□□□□□ -2.76
CKS1P20486 YGR151CYGR151C 336 nt-2.2□□□□□ -2.76
CKS1P20486 YOR309CYOR309C 381 nt-2.2□□□□□ -2.76
CKS1P20486 YBL071C-BYBL071C-B 99 nt-2.22□□□□□ -2.76
CKS1P20486 YOL083C-AYOL083C-A 141 nt-2.22□□□□□ -2.76
CKS1P20486 YOL164W-AYOL164W-A 183 nt-2.3□□□□□ -2.78
CKS1P20486 SPG3YDR504C 384 nt-2.31□□□□□ -2.78
CKS1P20486 YAL037C-AYAL037C-A 93 nt-2.38□□□□□ -2.79
CKS1P20486 YCL001W-BYCL001W-B 255 nt-2.38□□□□□ -2.79
CKS1P20486 snR47snR47 99 nt-2.42□□□□□ -2.8
CKS1P20486 snR6snR6 112 nt-2.44□□□□□ -2.8
CKS1P20486 tM(CAU)Q1tM(CAU)Q1 76 nt-2.49□□□□□ -2.81
CKS1P20486 YLR466C-BYLR466C-B 117 nt-2.52□□□□□ -2.81
CKS1P20486 YBL100W-CYBL100W-C 120 nt-2.52□□□□□ -2.81
CKS1P20486 Q0142Q0142 177 nt-2.54□□□□□ -2.82
CKS1P20486 YBR126W-BYBR126W-B 144 nt-2.55□□□□□ -2.82
CKS1P20486 YOR335W-AYOR335W-A 81 nt-2.58□□□□□ -2.82
CKS1P20486 YNL338WYNL338W 159 nt-2.63□□□□□ -2.83
CKS1P20486 snR73snR73 106 nt-2.65□□□□□ -2.83
CKS1P20486 YNL337WYNL337W 255 nt-2.65□□□□□ -2.83
CKS1P20486 YKL225WYKL225W 348 nt-2.66□□□□□ -2.84
CKS1P20486 tS(GCU)Q1tS(GCU)Q1 86 nt-2.68□□□□□ -2.84
CKS1P20486 RPL41BYDL133C-A 78 nt-2.71□□□□□ -2.84
CKS1P20486 tV(UAC)QtV(UAC)Q 76 nt-2.72□□□□□ -2.84
CKS1P20486 YDL114W-AYDL114W-A 114 nt-2.76□□□□□ -2.85
CKS1P20486 snR85snR85 171 nt-2.89□□□□□ -2.87
CKS1P20486 YGL041C-BYGL041C-B 183 nt-2.94□□□□□ -2.88
CKS1P20486 YDR034C-AYDR034C-A 177 nt-2.98□□□□□ -2.89
CKS1P20486 YGL007C-AYGL007C-A 87 nt-3.02□□□□□ -2.89
CKS1P20486 YNL103W-AYNL103W-A 90 nt-3.03□□□□□ -2.89
CKS1P20486 snR61snR61 90 nt-3.04□□□□□ -2.9
Retrieved 100 of 7,029 protein–RNA pairs in 12.3 ms