Protein–RNA interactions for Protein: P20433

RPB4, DNA-directed RNA polymerase II subunit RPB4, yeastyeast

Predicted RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB4P20433 PMP2YEL017C-A 132 nt-1.79□□□□□ -2.7
RPB4P20433 JLP2YMR132C 627 nt-1.79□□□□□ -2.7
RPB4P20433 YDR157WYDR157W 402 nt-1.8□□□□□ -2.7
RPB4P20433 tY(GUA)QtY(GUA)Q 84 nt-1.8□□□□□ -2.7
RPB4P20433 YEL014CYEL014C 306 nt-1.85□□□□□ -2.71
RPB4P20433 snR39BsnR39B 96 nt-1.85□□□□□ -2.71
RPB4P20433 tF(GAA)QtF(GAA)Q 75 nt-1.88□□□□□ -2.71
RPB4P20433 RPL39YJL189W 156 nt-1.88□□□□□ -2.71
RPB4P20433 YFL019CYFL019C 354 nt-1.89□□□□□ -2.71
RPB4P20433 snR67snR67 82 nt-1.91□□□□□ -2.72
RPB4P20433 YLR222C-AYLR222C-A 231 nt-1.91□□□□□ -2.72
RPB4P20433 YER181CYER181C 324 nt-1.92□□□□□ -2.72
RPB4P20433 YDR413CYDR413C 576 nt-1.94□□□□□ -2.72
RPB4P20433 YBR131C-AYBR131C-A 90 nt-1.97□□□□□ -2.72
RPB4P20433 tD(GUC)QtD(GUC)Q 75 nt-1.99□□□□□ -2.73
RPB4P20433 YDL240C-AYDL240C-A 138 nt-2.01□□□□□ -2.73
RPB4P20433 YLR286W-AYLR286W-A 135 nt-2.02□□□□□ -2.73
RPB4P20433 YOR329W-AYOR329W-A 210 nt-2.02□□□□□ -2.73
RPB4P20433 YNL277W-AYNL277W-A 189 nt-2.04□□□□□ -2.74
RPB4P20433 YDR118W-AYDR118W-A 117 nt-2.05□□□□□ -2.74
RPB4P20433 YKL118WYKL118W 312 nt-2.06□□□□□ -2.74
RPB4P20433 snR55snR55 98 nt-2.11□□□□□ -2.75
RPB4P20433 YBR126W-BYBR126W-B 144 nt-2.13□□□□□ -2.75
RPB4P20433 YDL159C-BYDL159C-B 177 nt-2.14□□□□□ -2.75
RPB4P20433 YBR178WYBR178W 375 nt-2.14□□□□□ -2.75
RPB4P20433 YNL097C-BYNL097C-B 123 nt-2.16□□□□□ -2.76
RPB4P20433 YNL205CYNL205C 423 nt-2.16□□□□□ -2.76
RPB4P20433 GIM4YEL003W 336 nt-2.18□□□□□ -2.76
RPB4P20433 VAR1Q0140 1197 nt-2.2□□□□□ -2.76
RPB4P20433 YML054C-AYML054C-A 159 nt-2.2□□□□□ -2.76
RPB4P20433 CDC65tQ(CUG)M 72 nt-2.21□□□□□ -2.76
RPB4P20433 YPR012WYPR012W 255 nt-2.24□□□□□ -2.77
RPB4P20433 snR48snR48 113 nt-2.27□□□□□ -2.77
RPB4P20433 snR77snR77 88 nt-2.32□□□□□ -2.78
RPB4P20433 YGR240C-AYGR240C-A 201 nt-2.32□□□□□ -2.78
RPB4P20433 YOL155W-AYOL155W-A 135 nt-2.34□□□□□ -2.78
RPB4P20433 YOR102WYOR102W 351 nt-2.36□□□□□ -2.79
RPB4P20433 YGL188C-AYGL188C-A 141 nt-2.41□□□□□ -2.8
RPB4P20433 YLR299C-AYLR299C-A 93 nt-2.41□□□□□ -2.8
RPB4P20433 YOR302WYOR302W 78 nt-2.41□□□□□ -2.8
RPB4P20433 snR81snR81 201 nt-2.44□□□□□ -2.8
RPB4P20433 tL(UAA)QtL(UAA)Q 85 nt-2.44□□□□□ -2.8
RPB4P20433 YDR543CYDR543C 300 nt-2.45□□□□□ -2.8
RPB4P20433 YMR315W-AYMR315W-A 108 nt-2.48□□□□□ -2.81
RPB4P20433 YPL152W-AYPL152W-A 99 nt-2.52□□□□□ -2.81
RPB4P20433 YBR196C-AYBR196C-A 150 nt-2.52□□□□□ -2.81
RPB4P20433 snR65snR65 100 nt-2.54□□□□□ -2.82
RPB4P20433 YLR342W-AYLR342W-A 174 nt-2.55□□□□□ -2.82
RPB4P20433 snR52snR52 92 nt-2.57□□□□□ -2.82
RPB4P20433 YHL015W-AYHL015W-A 84 nt-2.63□□□□□ -2.83
RPB4P20433 YOL166W-AYOL166W-A 156 nt-2.64□□□□□ -2.83
RPB4P20433 YOR376W-AYOR376W-A 156 nt-2.66□□□□□ -2.84
RPB4P20433 Q0142Q0142 177 nt-2.74□□□□□ -2.85
RPB4P20433 YHR180C-BYHR180C-B 105 nt-2.78□□□□□ -2.85
RPB4P20433 YNL198CYNL198C 303 nt-2.84□□□□□ -2.86
RPB4P20433 Q0144Q0144 330 nt-2.85□□□□□ -2.87
RPB4P20433 YOR309CYOR309C 381 nt-2.85□□□□□ -2.87
RPB4P20433 YOR316C-AYOR316C-A 210 nt-2.89□□□□□ -2.87
RPB4P20433 YJL150WYJL150W 303 nt-2.93□□□□□ -2.88
RPB4P20433 snR80snR80 171 nt-2.95□□□□□ -2.88
RPB4P20433 YHR175W-AYHR175W-A 150 nt-2.96□□□□□ -2.88
RPB4P20433 YKL106C-AYKL106C-A 120 nt-2.97□□□□□ -2.88
RPB4P20433 YOR231C-AYOR231C-A 201 nt-3.01□□□□□ -2.89
RPB4P20433 SOM1YEL059C-A 225 nt-3.03□□□□□ -2.89
RPB4P20433 snR56snR56 88 nt-3.04□□□□□ -2.9
RPB4P20433 YDR406W-AYDR406W-A 246 nt-3.12□□□□□ -2.91
RPB4P20433 tR(ACG)Q2tR(ACG)Q2 74 nt-3.12□□□□□ -2.91
RPB4P20433 YCR095W-AYCR095W-A 159 nt-3.16□□□□□ -2.92
RPB4P20433 YBR109W-AYBR109W-A 225 nt-3.17□□□□□ -2.92
RPB4P20433 YBR296C-AYBR296C-A 120 nt-3.2□□□□□ -2.92
RPB4P20433 RPL41AYDL184C 78 nt-3.24□□□□□ -2.93
RPB4P20433 YOL083C-AYOL083C-A 141 nt-3.24□□□□□ -2.93
RPB4P20433 YBL053WYBL053W 375 nt-3.25□□□□□ -2.93
RPB4P20433 YDR524W-CYDR524W-C 90 nt-3.28□□□□□ -2.93
RPB4P20433 snR38snR38 95 nt-3.42□□□□□ -2.96
RPB4P20433 snR6snR6 112 nt-3.46□□□□□ -2.96
RPB4P20433 YGR151CYGR151C 336 nt-3.47□□□□□ -2.96
RPB4P20433 YBL071C-BYBL071C-B 99 nt-3.52□□□□□ -2.97
RPB4P20433 YJR162CYJR162C 351 nt-3.53□□□□□ -2.97
RPB4P20433 YNL337WYNL337W 255 nt-3.53□□□□□ -2.97
RPB4P20433 YOL164W-AYOL164W-A 183 nt-3.57□□□□□ -2.98
RPB4P20433 YOR335W-AYOR335W-A 81 nt-3.64□□□□□ -2.99
RPB4P20433 snR73snR73 106 nt-3.66□□□□□ -3
RPB4P20433 YMR046W-AYMR046W-A 129 nt-3.67□□□□□ -3
RPB4P20433 YAL037C-AYAL037C-A 93 nt-3.71□□□□□ -3
RPB4P20433 snR47snR47 99 nt-3.72□□□□□ -3
RPB4P20433 YBL100W-CYBL100W-C 120 nt-3.78□□□□□ -3.01
RPB4P20433 RPL41BYDL133C-A 78 nt-3.82□□□□□ -3.02
RPB4P20433 YCL001W-BYCL001W-B 255 nt-3.85□□□□□ -3.03
RPB4P20433 SPG3YDR504C 384 nt-3.93□□□□□ -3.04
RPB4P20433 YDR524C-AYDR524C-A 120 nt-4.05□□□□□ -3.06
RPB4P20433 YKL225WYKL225W 348 nt-4.05□□□□□ -3.06
RPB4P20433 YDL114W-AYDL114W-A 114 nt-4.07□□□□□ -3.06
RPB4P20433 tV(UAC)QtV(UAC)Q 76 nt-4.08□□□□□ -3.06
RPB4P20433 tM(CAU)Q1tM(CAU)Q1 76 nt-4.13□□□□□ -3.07
RPB4P20433 tS(GCU)Q1tS(GCU)Q1 86 nt-4.16□□□□□ -3.08
RPB4P20433 YLR466C-BYLR466C-B 117 nt-4.17□□□□□ -3.08
RPB4P20433 snR85snR85 171 nt-4.18□□□□□ -3.08
RPB4P20433 YNL338WYNL338W 159 nt-4.34□□□□□ -3.1
RPB4P20433 YDR034C-AYDR034C-A 177 nt-4.56□□□□□ -3.14
Retrieved 100 of 7,029 protein–RNA pairs in 27 ms