Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.86■□□□□ 0.77
XRCC1P18887 AC060766.5-201ENST00000590539 871 ntBASIC19.86■□□□□ 0.77
XRCC1P18887 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.86■□□□□ 0.77
XRCC1P18887 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
XRCC1P18887 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
XRCC1P18887 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
XRCC1P18887 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
XRCC1P18887 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
XRCC1P18887 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.85■□□□□ 0.77
XRCC1P18887 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
XRCC1P18887 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
XRCC1P18887 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
XRCC1P18887 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
XRCC1P18887 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
XRCC1P18887 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.85■□□□□ 0.77
XRCC1P18887 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
XRCC1P18887 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
XRCC1P18887 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
XRCC1P18887 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
XRCC1P18887 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
XRCC1P18887 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
XRCC1P18887 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
XRCC1P18887 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
XRCC1P18887 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.85■□□□□ 0.77
XRCC1P18887 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.85■□□□□ 0.77
XRCC1P18887 UNC93B5-201ENST00000530315 699 ntBASIC19.85■□□□□ 0.77
XRCC1P18887 C2orf69P4-201ENST00000565394 541 ntBASIC19.85■□□□□ 0.77
XRCC1P18887 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
XRCC1P18887 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.85■□□□□ 0.77
XRCC1P18887 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
XRCC1P18887 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
XRCC1P18887 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
XRCC1P18887 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
XRCC1P18887 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
XRCC1P18887 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
XRCC1P18887 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
XRCC1P18887 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
XRCC1P18887 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
XRCC1P18887 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
XRCC1P18887 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
XRCC1P18887 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
XRCC1P18887 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
XRCC1P18887 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
XRCC1P18887 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.84■□□□□ 0.77
XRCC1P18887 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.84■□□□□ 0.77
XRCC1P18887 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
XRCC1P18887 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
XRCC1P18887 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
XRCC1P18887 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
XRCC1P18887 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
XRCC1P18887 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
XRCC1P18887 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
XRCC1P18887 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
XRCC1P18887 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
XRCC1P18887 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
XRCC1P18887 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
XRCC1P18887 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
XRCC1P18887 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.77
XRCC1P18887 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
XRCC1P18887 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
XRCC1P18887 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
XRCC1P18887 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
XRCC1P18887 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
XRCC1P18887 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.83■□□□□ 0.77
XRCC1P18887 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
XRCC1P18887 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.83■□□□□ 0.76
XRCC1P18887 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.83■□□□□ 0.76
XRCC1P18887 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.83■□□□□ 0.76
XRCC1P18887 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
XRCC1P18887 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.83■□□□□ 0.76
XRCC1P18887 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.83■□□□□ 0.76
XRCC1P18887 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
XRCC1P18887 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
XRCC1P18887 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
XRCC1P18887 AC099778.1-201ENST00000568593 1911 ntBASIC19.82■□□□□ 0.76
XRCC1P18887 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
XRCC1P18887 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.82■□□□□ 0.76
XRCC1P18887 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
XRCC1P18887 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
XRCC1P18887 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
XRCC1P18887 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.82■□□□□ 0.76
XRCC1P18887 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
XRCC1P18887 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.82■□□□□ 0.76
XRCC1P18887 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
XRCC1P18887 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
XRCC1P18887 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.82■□□□□ 0.76
XRCC1P18887 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
XRCC1P18887 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.82■□□□□ 0.76
XRCC1P18887 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.82■□□□□ 0.76
XRCC1P18887 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.82■□□□□ 0.76
XRCC1P18887 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
XRCC1P18887 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
XRCC1P18887 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
XRCC1P18887 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
XRCC1P18887 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
XRCC1P18887 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
XRCC1P18887 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.82■□□□□ 0.76
XRCC1P18887 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.82■□□□□ 0.76
XRCC1P18887 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
XRCC1P18887 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms