Protein–RNA interactions for Protein: P17536

TPM1, Tropomyosin-1, yeastyeast

Known RBP Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TPM1P17536 YEL014CYEL014C 306 nt-0.97□□□□□ -2.56
TPM1P17536 YBR131C-AYBR131C-A 90 nt-0.98□□□□□ -2.57
TPM1P17536 YJL182CYJL182C 318 nt-0.99□□□□□ -2.57
TPM1P17536 snR49snR49 165 nt-0.99□□□□□ -2.57
TPM1P17536 YPL060C-AYPL060C-A 3315 nt-1□□□□□ -2.57
TPM1P17536 YHR175W-AYHR175W-A 150 nt-1.03□□□□□ -2.57
TPM1P17536 YOR170WYOR170W 306 nt-1.03□□□□□ -2.57
TPM1P17536 snR69snR69 101 nt-1.04□□□□□ -2.58
TPM1P17536 snR39BsnR39B 96 nt-1.04□□□□□ -2.58
TPM1P17536 YGR146C-AYGR146C-A 162 nt-1.07□□□□□ -2.58
TPM1P17536 YOL155W-AYOL155W-A 135 nt-1.07□□□□□ -2.58
TPM1P17536 snR65snR65 100 nt-1.12□□□□□ -2.59
TPM1P17536 snR161snR161 161 nt-1.13□□□□□ -2.59
TPM1P17536 RDS3YPR094W 324 nt-1.13□□□□□ -2.59
TPM1P17536 YER090C-AYER090C-A 90 nt-1.14□□□□□ -2.59
TPM1P17536 PMP2YEL017C-A 132 nt-1.16□□□□□ -2.6
TPM1P17536 YHL009W-BYHL009W-B 5409 nt-1.17□□□□□ -2.6
TPM1P17536 snR56snR56 88 nt-1.18□□□□□ -2.6
TPM1P17536 YOR329W-AYOR329W-A 210 nt-1.21□□□□□ -2.6
TPM1P17536 tR(ACG)Q2tR(ACG)Q2 74 nt-1.22□□□□□ -2.6
TPM1P17536 YPL152W-AYPL152W-A 99 nt-1.24□□□□□ -2.61
TPM1P17536 snR50snR50 90 nt-1.24□□□□□ -2.61
TPM1P17536 YNL097C-BYNL097C-B 123 nt-1.26□□□□□ -2.61
TPM1P17536 YNL266WYNL266W 420 nt-1.26□□□□□ -2.61
TPM1P17536 YGL188C-AYGL188C-A 141 nt-1.29□□□□□ -2.62
TPM1P17536 YOR302WYOR302W 78 nt-1.32□□□□□ -2.62
TPM1P17536 tD(GUC)QtD(GUC)Q 75 nt-1.33□□□□□ -2.62
TPM1P17536 tP(UGG)QtP(UGG)Q 72 nt-1.33□□□□□ -2.62
TPM1P17536 YLR342W-AYLR342W-A 174 nt-1.35□□□□□ -2.63
TPM1P17536 YNL205CYNL205C 423 nt-1.37□□□□□ -2.63
TPM1P17536 snR52snR52 92 nt-1.37□□□□□ -2.63
TPM1P17536 YBR223W-AYBR223W-A 120 nt-1.38□□□□□ -2.63
TPM1P17536 snR67snR67 82 nt-1.4□□□□□ -2.63
TPM1P17536 YLR286W-AYLR286W-A 135 nt-1.4□□□□□ -2.63
TPM1P17536 JLP2YMR132C 627 nt-1.42□□□□□ -2.64
TPM1P17536 snR48snR48 113 nt-1.42□□□□□ -2.64
TPM1P17536 YOR102WYOR102W 351 nt-1.44□□□□□ -2.64
TPM1P17536 YDR524W-CYDR524W-C 90 nt-1.45□□□□□ -2.64
TPM1P17536 YBR178WYBR178W 375 nt-1.46□□□□□ -2.64
TPM1P17536 YDL159C-BYDL159C-B 177 nt-1.47□□□□□ -2.64
TPM1P17536 YOR231C-AYOR231C-A 201 nt-1.51□□□□□ -2.65
TPM1P17536 SKI7YOR076C 2244 nt-1.55□□□□□ -2.66
TPM1P17536 YHL015W-AYHL015W-A 84 nt-1.55□□□□□ -2.66
TPM1P17536 tL(UAA)QtL(UAA)Q 85 nt-1.6□□□□□ -2.67
TPM1P17536 snR80snR80 171 nt-1.65□□□□□ -2.67
TPM1P17536 YLR299C-AYLR299C-A 93 nt-1.7□□□□□ -2.68
TPM1P17536 YDR406W-AYDR406W-A 246 nt-1.71□□□□□ -2.68
TPM1P17536 YBR196C-AYBR196C-A 150 nt-1.71□□□□□ -2.68
TPM1P17536 tY(GUA)QtY(GUA)Q 84 nt-1.77□□□□□ -2.69
TPM1P17536 YNR077CYNR077C 255 nt-1.77□□□□□ -2.69
TPM1P17536 snR77snR77 88 nt-1.8□□□□□ -2.7
TPM1P17536 CDC65tQ(CUG)M 72 nt-1.8□□□□□ -2.7
TPM1P17536 YML054C-AYML054C-A 159 nt-1.81□□□□□ -2.7
TPM1P17536 YNL198CYNL198C 303 nt-1.92□□□□□ -2.72
TPM1P17536 YGR240C-AYGR240C-A 201 nt-1.96□□□□□ -2.72
TPM1P17536 snR81snR81 201 nt-1.98□□□□□ -2.73
TPM1P17536 SOM1YEL059C-A 225 nt-2□□□□□ -2.73
TPM1P17536 YMR315W-AYMR315W-A 108 nt-2□□□□□ -2.73
TPM1P17536 YHR180C-BYHR180C-B 105 nt-2.01□□□□□ -2.73
TPM1P17536 YCR095W-AYCR095W-A 159 nt-2.09□□□□□ -2.74
TPM1P17536 YJL150WYJL150W 303 nt-2.11□□□□□ -2.75
TPM1P17536 YMR046W-AYMR046W-A 129 nt-2.12□□□□□ -2.75
TPM1P17536 YOR376W-AYOR376W-A 156 nt-2.16□□□□□ -2.76
TPM1P17536 YBL053WYBL053W 375 nt-2.2□□□□□ -2.76
TPM1P17536 YOR309CYOR309C 381 nt-2.27□□□□□ -2.77
TPM1P17536 Q0142Q0142 177 nt-2.32□□□□□ -2.78
TPM1P17536 YKL106C-AYKL106C-A 120 nt-2.36□□□□□ -2.79
TPM1P17536 SPG3YDR504C 384 nt-2.38□□□□□ -2.79
TPM1P17536 YOR316C-AYOR316C-A 210 nt-2.41□□□□□ -2.8
TPM1P17536 RPL41AYDL184C 78 nt-2.44□□□□□ -2.8
TPM1P17536 tM(CAU)Q1tM(CAU)Q1 76 nt-2.44□□□□□ -2.8
TPM1P17536 YBR126W-BYBR126W-B 144 nt-2.46□□□□□ -2.8
TPM1P17536 YBR296C-AYBR296C-A 120 nt-2.46□□□□□ -2.8
TPM1P17536 YGR151CYGR151C 336 nt-2.48□□□□□ -2.81
TPM1P17536 YOL083C-AYOL083C-A 141 nt-2.55□□□□□ -2.82
TPM1P17536 YBR109W-AYBR109W-A 225 nt-2.56□□□□□ -2.82
TPM1P17536 YLR466C-BYLR466C-B 117 nt-2.65□□□□□ -2.83
TPM1P17536 YBL071C-BYBL071C-B 99 nt-2.67□□□□□ -2.84
TPM1P17536 YCL001W-BYCL001W-B 255 nt-2.67□□□□□ -2.84
TPM1P17536 YOL164W-AYOL164W-A 183 nt-2.68□□□□□ -2.84
TPM1P17536 YBL100W-CYBL100W-C 120 nt-2.74□□□□□ -2.85
TPM1P17536 snR6snR6 112 nt-2.75□□□□□ -2.85
TPM1P17536 YAL037C-AYAL037C-A 93 nt-2.75□□□□□ -2.85
TPM1P17536 snR38snR38 95 nt-2.8□□□□□ -2.86
TPM1P17536 snR47snR47 99 nt-2.81□□□□□ -2.86
TPM1P17536 YNL338WYNL338W 159 nt-2.82□□□□□ -2.86
TPM1P17536 YOR335W-AYOR335W-A 81 nt-2.9□□□□□ -2.87
TPM1P17536 snR73snR73 106 nt-2.93□□□□□ -2.88
TPM1P17536 YNL337WYNL337W 255 nt-3□□□□□ -2.89
TPM1P17536 YDR543CYDR543C 300 nt-3.15□□□□□ -2.91
TPM1P17536 RPL41BYDL133C-A 78 nt-3.16□□□□□ -2.92
TPM1P17536 YKL225WYKL225W 348 nt-3.19□□□□□ -2.92
TPM1P17536 tS(GCU)Q1tS(GCU)Q1 86 nt-3.25□□□□□ -2.93
TPM1P17536 Q0032Q0032 291 nt-3.27□□□□□ -2.93
TPM1P17536 tV(UAC)QtV(UAC)Q 76 nt-3.35□□□□□ -2.95
TPM1P17536 YDL114W-AYDL114W-A 114 nt-3.36□□□□□ -2.95
TPM1P17536 YGL041C-BYGL041C-B 183 nt-3.38□□□□□ -2.95
TPM1P17536 YDR524C-AYDR524C-A 120 nt-3.4□□□□□ -2.95
TPM1P17536 snR61snR61 90 nt-3.48□□□□□ -2.97
TPM1P17536 YGL007C-AYGL007C-A 87 nt-3.49□□□□□ -2.97
Retrieved 100 of 7,029 protein–RNA pairs in 12.7 ms