Protein–RNA interactions for Protein: P16862

PFK2, ATP-dependent 6-phosphofructokinase subunit beta, yeastyeast

Known RBP RIP-Chip data

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PFK2P16862 UTP10YJL109C 5310 nt0.58□□□□□ -2.32
PFK2P16862 YDL007C-AYDL007C-A 258 nt0.58□□□□□ -2.32
PFK2P16862 SDH6YDR379C-A 240 nt0.58□□□□□ -2.32
PFK2P16862 YBR072C-AYBR072C-A 162 nt0.58□□□□□ -2.32
PFK2P16862 snR39BsnR39B 96 nt0.58□□□□□ -2.32
PFK2P16862 YDR371C-AYDR371C-A 105 nt0.57□□□□□ -2.32
PFK2P16862 YLL006W-AYLL006W-A 177 nt0.57□□□□□ -2.32
PFK2P16862 GLG1YKR058W 1851 nt0.56□□□□□ -2.32
PFK2P16862 SBH1YER087C-B 249 nt0.56□□□□□ -2.32
PFK2P16862 ESP1YGR098C 4893 nt0.56□□□□□ -2.32
PFK2P16862 YBL100W-BYBL100W-B 5313 nt0.52□□□□□ -2.33
PFK2P16862 MLP2YIL149C 5040 nt0.52□□□□□ -2.33
PFK2P16862 YDR210WYDR210W 228 nt0.52□□□□□ -2.33
PFK2P16862 YER078W-AYER078W-A 165 nt0.52□□□□□ -2.33
PFK2P16862 ORC3YLL004W 1851 nt0.51□□□□□ -2.33
PFK2P16862 tM(CAU)Q2tM(CAU)Q2 78 nt0.5□□□□□ -2.33
PFK2P16862 RCO1YMR075W 2055 nt0.5□□□□□ -2.33
PFK2P16862 YNL067W-BYNL067W-B 141 nt0.49□□□□□ -2.33
PFK2P16862 YGR164WYGR164W 336 nt0.47□□□□□ -2.33
PFK2P16862 YGR146C-AYGR146C-A 162 nt0.44□□□□□ -2.34
PFK2P16862 YNL054W-BYNL054W-B 5250 nt0.42□□□□□ -2.34
PFK2P16862 ATP8Q0080 147 nt0.41□□□□□ -2.34
PFK2P16862 YIL071W-AYIL071W-A 477 nt0.4□□□□□ -2.35
PFK2P16862 CSE1YGL238W 2883 nt0.4□□□□□ -2.35
PFK2P16862 YNL170WYNL170W 396 nt0.39□□□□□ -2.35
PFK2P16862 YCL001W-BYCL001W-B 255 nt0.38□□□□□ -2.35
PFK2P16862 Q0092Q0092 141 nt0.36□□□□□ -2.35
PFK2P16862 SOM1YEL059C-A 225 nt0.35□□□□□ -2.35
PFK2P16862 YCR095W-AYCR095W-A 159 nt0.34□□□□□ -2.36
PFK2P16862 YNL205CYNL205C 423 nt0.34□□□□□ -2.36
PFK2P16862 YBR099CYBR099C 384 nt0.34□□□□□ -2.36
PFK2P16862 YOR186C-AYOR186C-A 210 nt0.33□□□□□ -2.36
PFK2P16862 EST1YLR233C 2100 nt0.32□□□□□ -2.36
PFK2P16862 PMP2YEL017C-A 132 nt0.31□□□□□ -2.36
PFK2P16862 YOL013W-AYOL013W-A 192 nt0.31□□□□□ -2.36
PFK2P16862 SOV1YMR066W 2697 nt0.31□□□□□ -2.36
PFK2P16862 snR69snR69 101 nt0.29□□□□□ -2.36
PFK2P16862 SEC10YLR166C 2616 nt0.27□□□□□ -2.37
PFK2P16862 YNL266WYNL266W 420 nt0.26□□□□□ -2.37
PFK2P16862 YJL077W-AYJL077W-A 87 nt0.24□□□□□ -2.37
PFK2P16862 tD(GUC)QtD(GUC)Q 75 nt0.22□□□□□ -2.37
PFK2P16862 YBR178WYBR178W 375 nt0.21□□□□□ -2.38
PFK2P16862 RDS3YPR094W 324 nt0.2□□□□□ -2.38
PFK2P16862 tQ(UUG)QtQ(UUG)Q 76 nt0.17□□□□□ -2.38
PFK2P16862 YBR196C-AYBR196C-A 150 nt0.16□□□□□ -2.38
PFK2P16862 snR45snR45 172 nt0.16□□□□□ -2.38
PFK2P16862 YLR286W-AYLR286W-A 135 nt0.13□□□□□ -2.39
PFK2P16862 YDL159C-BYDL159C-B 177 nt0.11□□□□□ -2.39
PFK2P16862 YER090C-AYER090C-A 90 nt0.11□□□□□ -2.39
PFK2P16862 snR50snR50 90 nt0.1□□□□□ -2.39
PFK2P16862 YNL103W-AYNL103W-A 90 nt0.08□□□□□ -2.4
PFK2P16862 Q0143Q0143 153 nt0.06□□□□□ -2.4
PFK2P16862 YLR299C-AYLR299C-A 93 nt0.06□□□□□ -2.4
PFK2P16862 snR128snR128 126 nt0.05□□□□□ -2.4
PFK2P16862 YML100W-AYML100W-A 174 nt0.03□□□□□ -2.4
PFK2P16862 snR81snR81 201 nt0.01□□□□□ -2.41
PFK2P16862 snR61snR61 90 nt0□□□□□ -2.41
PFK2P16862 YBL071C-BYBL071C-B 99 nt0□□□□□ -2.41
PFK2P16862 YAL037C-AYAL037C-A 93 nt-0.01□□□□□ -2.41
PFK2P16862 YOL083C-AYOL083C-A 141 nt-0.01□□□□□ -2.41
PFK2P16862 YJL113WYJL113W 4647 nt-0.02□□□□□ -2.41
PFK2P16862 TFB5YDR079C-A 219 nt-0.03□□□□□ -2.41
PFK2P16862 YGL041C-BYGL041C-B 183 nt-0.04□□□□□ -2.42
PFK2P16862 YML054C-AYML054C-A 159 nt-0.07□□□□□ -2.42
PFK2P16862 snR67snR67 82 nt-0.08□□□□□ -2.42
PFK2P16862 snR85snR85 171 nt-0.08□□□□□ -2.42
PFK2P16862 YOL164W-AYOL164W-A 183 nt-0.09□□□□□ -2.42
PFK2P16862 YHR180C-BYHR180C-B 105 nt-0.13□□□□□ -2.43
PFK2P16862 SKI7YOR076C 2244 nt-0.15□□□□□ -2.43
PFK2P16862 YBR109W-AYBR109W-A 225 nt-0.19□□□□□ -2.44
PFK2P16862 SBH2YER019C-A 267 nt-0.2□□□□□ -2.44
PFK2P16862 YGR240C-AYGR240C-A 201 nt-0.2□□□□□ -2.44
PFK2P16862 PAU9YBL108C-A 129 nt-0.2□□□□□ -2.44
PFK2P16862 snR47snR47 99 nt-0.2□□□□□ -2.44
PFK2P16862 tA(UGC)QtA(UGC)Q 76 nt-0.21□□□□□ -2.44
PFK2P16862 YMR326CYMR326C 309 nt-0.21□□□□□ -2.44
PFK2P16862 tS(GCU)Q1tS(GCU)Q1 86 nt-0.23□□□□□ -2.45
PFK2P16862 YBL100W-CYBL100W-C 120 nt-0.23□□□□□ -2.45
PFK2P16862 YBL109WYBL109W 336 nt-0.24□□□□□ -2.45
PFK2P16862 YHR217CYHR217C 462 nt-0.25□□□□□ -2.45
PFK2P16862 snR38snR38 95 nt-0.25□□□□□ -2.45
PFK2P16862 YBR296C-AYBR296C-A 120 nt-0.27□□□□□ -2.45
PFK2P16862 RPL41AYDL184C 78 nt-0.28□□□□□ -2.45
PFK2P16862 snR62snR62 100 nt-0.29□□□□□ -2.46
PFK2P16862 YDR034C-AYDR034C-A 177 nt-0.34□□□□□ -2.46
PFK2P16862 YDR524C-AYDR524C-A 120 nt-0.36□□□□□ -2.47
PFK2P16862 YKL225WYKL225W 348 nt-0.4□□□□□ -2.47
PFK2P16862 YHL009W-BYHL009W-B 5409 nt-0.4□□□□□ -2.47
PFK2P16862 URB1YKL014C 5295 nt-0.42□□□□□ -2.48
PFK2P16862 YOR376W-AYOR376W-A 156 nt-0.43□□□□□ -2.48
PFK2P16862 snR33snR33 183 nt-0.45□□□□□ -2.48
PFK2P16862 YKL106C-AYKL106C-A 120 nt-0.46□□□□□ -2.48
PFK2P16862 snR161snR161 161 nt-0.47□□□□□ -2.48
PFK2P16862 YLL066W-BYLL066W-B 171 nt-0.48□□□□□ -2.49
PFK2P16862 tT(UGU)G1tT(UGU)G1 72 nt-0.51□□□□□ -2.49
PFK2P16862 tT(UGU)G2tT(UGU)G2 72 nt-0.51□□□□□ -2.49
PFK2P16862 tT(UGU)PtT(UGU)P 72 nt-0.51□□□□□ -2.49
PFK2P16862 YNR077CYNR077C 255 nt-0.51□□□□□ -2.49
PFK2P16862 tP(UGG)QtP(UGG)Q 72 nt-0.53□□□□□ -2.49
PFK2P16862 YOR316C-AYOR316C-A 210 nt-0.56□□□□□ -2.5
Retrieved 100 of 7,029 protein–RNA pairs in 10.9 ms