Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COL6A2P12110 AC105020.6-201ENST00000621523 1217 ntBASIC19.68■□□□□ 0.74
COL6A2P12110 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL6A2P12110 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.68■□□□□ 0.74
COL6A2P12110 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COL6A2P12110 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COL6A2P12110 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.68■□□□□ 0.74
COL6A2P12110 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
COL6A2P12110 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.68■□□□□ 0.74
COL6A2P12110 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.68■□□□□ 0.74
COL6A2P12110 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL6A2P12110 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COL6A2P12110 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL6A2P12110 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
COL6A2P12110 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL6A2P12110 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL6A2P12110 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL6A2P12110 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL6A2P12110 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL6A2P12110 KRT18P68-201ENST00000392293 1000 ntBASIC19.67■□□□□ 0.74
COL6A2P12110 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.67■□□□□ 0.74
COL6A2P12110 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COL6A2P12110 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.67■□□□□ 0.74
COL6A2P12110 MFSD11-216ENST00000590393 1141 ntBASIC19.67■□□□□ 0.74
COL6A2P12110 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
COL6A2P12110 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.67■□□□□ 0.74
COL6A2P12110 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.67■□□□□ 0.74
COL6A2P12110 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL6A2P12110 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL6A2P12110 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL6A2P12110 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.66■□□□□ 0.74
COL6A2P12110 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL6A2P12110 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL6A2P12110 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL6A2P12110 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
COL6A2P12110 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
COL6A2P12110 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL6A2P12110 AC137761.2-201ENST00000561729 223 ntBASIC19.66■□□□□ 0.74
COL6A2P12110 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.66■□□□□ 0.74
COL6A2P12110 AC145350.3-201ENST00000569033 163 ntBASIC19.66■□□□□ 0.74
COL6A2P12110 MIR6821-201ENST00000617625 74 ntBASIC19.66■□□□□ 0.74
COL6A2P12110 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.66■□□□□ 0.74
COL6A2P12110 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL6A2P12110 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL6A2P12110 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.66■□□□□ 0.74
COL6A2P12110 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL6A2P12110 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL6A2P12110 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL6A2P12110 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.66■□□□□ 0.74
COL6A2P12110 AC068338.2-201ENST00000563278 1430 ntBASIC19.66■□□□□ 0.74
COL6A2P12110 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL6A2P12110 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL6A2P12110 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL6A2P12110 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
COL6A2P12110 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL6A2P12110 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL6A2P12110 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL6A2P12110 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL6A2P12110 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL6A2P12110 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL6A2P12110 HLA-G-202ENST00000376815 851 ntBASIC19.65■□□□□ 0.74
COL6A2P12110 HLA-G-203ENST00000376818 1127 ntBASIC19.65■□□□□ 0.74
COL6A2P12110 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL6A2P12110 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.65■□□□□ 0.74
COL6A2P12110 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.65■□□□□ 0.74
COL6A2P12110 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.65■□□□□ 0.74
COL6A2P12110 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.65■□□□□ 0.74
COL6A2P12110 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL6A2P12110 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL6A2P12110 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL6A2P12110 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL6A2P12110 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
COL6A2P12110 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL6A2P12110 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.65■□□□□ 0.74
COL6A2P12110 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.65■□□□□ 0.74
COL6A2P12110 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL6A2P12110 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL6A2P12110 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.65■□□□□ 0.74
COL6A2P12110 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL6A2P12110 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL6A2P12110 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
COL6A2P12110 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.64■□□□□ 0.74
COL6A2P12110 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
COL6A2P12110 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.64■□□□□ 0.74
COL6A2P12110 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COL6A2P12110 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.64■□□□□ 0.73
COL6A2P12110 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL6A2P12110 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.64■□□□□ 0.73
COL6A2P12110 CNN2P6-201ENST00000439038 900 ntBASIC19.64■□□□□ 0.73
COL6A2P12110 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.64■□□□□ 0.73
COL6A2P12110 DUX4L16-201ENST00000555130 1264 ntBASIC19.64■□□□□ 0.73
COL6A2P12110 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.64■□□□□ 0.73
COL6A2P12110 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.64■□□□□ 0.73
COL6A2P12110 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL6A2P12110 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL6A2P12110 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
COL6A2P12110 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COL6A2P12110 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COL6A2P12110 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL6A2P12110 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms