Protein–RNA interactions for Protein: P10081

TIF1, ATP-dependent RNA helicase eIF4A, yeastyeast

Known RBP Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TIF1P10081 HKR1YDR420W 5409 nt1.41□□□□□ -2.18
TIF1P10081 YDR034C-AYDR034C-A 177 nt1.41□□□□□ -2.18
TIF1P10081 RDS3YPR094W 324 nt1.4□□□□□ -2.19
TIF1P10081 SIP4YJL089W 2490 nt1.39□□□□□ -2.19
TIF1P10081 tV(UAC)BtV(UAC)B 74 nt1.39□□□□□ -2.19
TIF1P10081 tV(UAC)DtV(UAC)D 74 nt1.39□□□□□ -2.19
TIF1P10081 YLR299C-AYLR299C-A 93 nt1.39□□□□□ -2.19
TIF1P10081 NIP1YMR309C 2439 nt1.38□□□□□ -2.19
TIF1P10081 YDL159C-BYDL159C-B 177 nt1.36□□□□□ -2.19
TIF1P10081 BUL2YML111W 2763 nt1.36□□□□□ -2.19
TIF1P10081 YPR117WYPR117W 7470 nt1.33□□□□□ -2.2
TIF1P10081 snR47snR47 99 nt1.29□□□□□ -2.2
TIF1P10081 PAU12YGR294W 363 nt1.26□□□□□ -2.21
TIF1P10081 UTP20YBL004W 7482 nt1.25□□□□□ -2.21
TIF1P10081 RKR1YMR247C 4689 nt1.25□□□□□ -2.21
TIF1P10081 PAU24YBR301W 363 nt1.25□□□□□ -2.21
TIF1P10081 YNL284C-BYNL284C-B 5268 nt1.24□□□□□ -2.21
TIF1P10081 PET111YMR257C 2403 nt1.21□□□□□ -2.22
TIF1P10081 tQ(UUG)QtQ(UUG)Q 76 nt1.19□□□□□ -2.22
TIF1P10081 ORC3YLL004W 1851 nt1.19□□□□□ -2.22
TIF1P10081 MLP1YKR095W 5628 nt1.17□□□□□ -2.22
TIF1P10081 YDR371C-AYDR371C-A 105 nt1.16□□□□□ -2.22
TIF1P10081 YOR192C-BYOR192C-B 5313 nt1.16□□□□□ -2.22
TIF1P10081 YHR180C-BYHR180C-B 105 nt1.15□□□□□ -2.23
TIF1P10081 MLP2YIL149C 5040 nt1.15□□□□□ -2.23
TIF1P10081 BEM2YER155C 6504 nt1.14□□□□□ -2.23
TIF1P10081 DOP1YDR141C 5097 nt1.14□□□□□ -2.23
TIF1P10081 YJR029WYJR029W 5268 nt1.12□□□□□ -2.23
TIF1P10081 IQG1YPL242C 4488 nt1.11□□□□□ -2.23
TIF1P10081 YML054C-AYML054C-A 159 nt1.1□□□□□ -2.23
TIF1P10081 YNL054W-BYNL054W-B 5250 nt1.1□□□□□ -2.23
TIF1P10081 tF(GAA)BtF(GAA)B 73 nt1.08□□□□□ -2.24
TIF1P10081 tF(GAA)FtF(GAA)F 73 nt1.08□□□□□ -2.24
TIF1P10081 tF(GAA)GtF(GAA)G 73 nt1.08□□□□□ -2.24
TIF1P10081 tF(GAA)H1tF(GAA)H1 73 nt1.08□□□□□ -2.24
TIF1P10081 tF(GAA)H2tF(GAA)H2 73 nt1.08□□□□□ -2.24
TIF1P10081 tF(GAA)MtF(GAA)M 73 nt1.08□□□□□ -2.24
TIF1P10081 tF(GAA)P1tF(GAA)P1 73 nt1.08□□□□□ -2.24
TIF1P10081 tF(GAA)P2tF(GAA)P2 73 nt1.08□□□□□ -2.24
TIF1P10081 YER090C-AYER090C-A 90 nt1.08□□□□□ -2.24
TIF1P10081 YPR137C-BYPR137C-B 5268 nt1.07□□□□□ -2.24
TIF1P10081 VAM6YDL077C 3150 nt1.06□□□□□ -2.24
TIF1P10081 snR64snR64 101 nt1.05□□□□□ -2.24
TIF1P10081 EMT1tM(CAU)D 73 nt1.05□□□□□ -2.24
TIF1P10081 EMT5tM(CAU)J1 73 nt1.05□□□□□ -2.24
TIF1P10081 EMT3tM(CAU)J2 73 nt1.05□□□□□ -2.24
TIF1P10081 EMT4tM(CAU)M 73 nt1.05□□□□□ -2.24
TIF1P10081 EMT2tM(CAU)O2 73 nt1.05□□□□□ -2.24
TIF1P10081 snR53snR53 91 nt1.05□□□□□ -2.24
TIF1P10081 RPL41AYDL184C 78 nt1.04□□□□□ -2.24
TIF1P10081 YBR109W-AYBR109W-A 225 nt1.02□□□□□ -2.25
TIF1P10081 YBR296C-AYBR296C-A 120 nt1.02□□□□□ -2.25
TIF1P10081 YKL225WYKL225W 348 nt1□□□□□ -2.25
TIF1P10081 YMR160WYMR160W 2451 nt0.97□□□□□ -2.25
TIF1P10081 BUD3YCL014W 4911 nt0.97□□□□□ -2.25
TIF1P10081 YBL100W-BYBL100W-B 5313 nt0.97□□□□□ -2.25
TIF1P10081 snR50snR50 90 nt0.95□□□□□ -2.26
TIF1P10081 AI1Q0050 2505 nt0.95□□□□□ -2.26
TIF1P10081 YPR159C-AYPR159C-A 102 nt0.9□□□□□ -2.27
TIF1P10081 YOR186C-AYOR186C-A 210 nt0.89□□□□□ -2.27
TIF1P10081 YOL014WYOL014W 375 nt0.88□□□□□ -2.27
TIF1P10081 snR67snR67 82 nt0.87□□□□□ -2.27
TIF1P10081 snR38snR38 95 nt0.85□□□□□ -2.27
TIF1P10081 tT(AGU)BtT(AGU)B 73 nt0.81□□□□□ -2.28
TIF1P10081 tT(AGU)CtT(AGU)C 73 nt0.81□□□□□ -2.28
TIF1P10081 tT(AGU)DtT(AGU)D 73 nt0.81□□□□□ -2.28
TIF1P10081 tT(AGU)HtT(AGU)H 73 nt0.81□□□□□ -2.28
TIF1P10081 tT(AGU)I1tT(AGU)I1 73 nt0.81□□□□□ -2.28
TIF1P10081 tT(AGU)I2tT(AGU)I2 73 nt0.81□□□□□ -2.28
TIF1P10081 tT(AGU)JtT(AGU)J 73 nt0.81□□□□□ -2.28
TIF1P10081 tT(AGU)N1tT(AGU)N1 73 nt0.81□□□□□ -2.28
TIF1P10081 tT(AGU)N2tT(AGU)N2 73 nt0.81□□□□□ -2.28
TIF1P10081 tT(AGU)O1tT(AGU)O1 73 nt0.81□□□□□ -2.28
TIF1P10081 tT(AGU)O2tT(AGU)O2 73 nt0.81□□□□□ -2.28
TIF1P10081 YKL145W-AYKL145W-A 93 nt0.77□□□□□ -2.29
TIF1P10081 FMP27YLR454W 7887 nt0.71□□□□□ -2.3
TIF1P10081 SKI7YOR076C 2244 nt0.7□□□□□ -2.3
TIF1P10081 THO2YNL139C 4794 nt0.67□□□□□ -2.3
TIF1P10081 UTP10YJL109C 5310 nt0.67□□□□□ -2.3
TIF1P10081 YMR272W-AYMR272W-A 114 nt0.66□□□□□ -2.3
TIF1P10081 YML100W-AYML100W-A 174 nt0.59□□□□□ -2.31
TIF1P10081 ESP1YGR098C 4893 nt0.58□□□□□ -2.32
TIF1P10081 MYO1YHR023W 5787 nt0.57□□□□□ -2.32
TIF1P10081 YDL159W-AYDL159W-A 132 nt0.54□□□□□ -2.32
TIF1P10081 SOV1YMR066W 2697 nt0.53□□□□□ -2.32
TIF1P10081 YGR122C-AYGR122C-A 129 nt0.51□□□□□ -2.33
TIF1P10081 YLR149C-AYLR149C-A 87 nt0.46□□□□□ -2.34
TIF1P10081 YOL013W-AYOL013W-A 192 nt0.46□□□□□ -2.34
TIF1P10081 YKL106C-AYKL106C-A 120 nt0.43□□□□□ -2.34
TIF1P10081 YER078W-AYER078W-A 165 nt0.42□□□□□ -2.34
TIF1P10081 snR128snR128 126 nt0.41□□□□□ -2.34
TIF1P10081 YKL096C-BYKL096C-B 150 nt0.34□□□□□ -2.36
TIF1P10081 PAU9YBL108C-A 129 nt0.2□□□□□ -2.38
TIF1P10081 YDL114W-AYDL114W-A 114 nt0.17□□□□□ -2.38
TIF1P10081 YOR376W-AYOR376W-A 156 nt0.15□□□□□ -2.39
TIF1P10081 YOR316C-AYOR316C-A 210 nt0.14□□□□□ -2.39
TIF1P10081 tV(UAC)QtV(UAC)Q 76 nt0.07□□□□□ -2.4
TIF1P10081 tA(UGC)QtA(UGC)Q 76 nt0.06□□□□□ -2.4
TIF1P10081 SBH2YER019C-A 267 nt0.02□□□□□ -2.41
TIF1P10081 YJL113WYJL113W 4647 nt-0.07□□□□□ -2.42
Retrieved 100 of 7,029 protein–RNA pairs in 12.1 ms