Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC16.75■□□□□ 0.27
CD74P04233 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CD74P04233 AC008764.7-201ENST00000593779 1081 ntBASIC16.75■□□□□ 0.27
CD74P04233 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CD74P04233 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
CD74P04233 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CD74P04233 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CD74P04233 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CD74P04233 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CD74P04233 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CD74P04233 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CD74P04233 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.75■□□□□ 0.27
CD74P04233 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.74■□□□□ 0.27
CD74P04233 CROCCP3-202ENST00000420820 1947 ntBASIC16.74■□□□□ 0.27
CD74P04233 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD74P04233 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.74■□□□□ 0.27
CD74P04233 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD74P04233 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD74P04233 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CD74P04233 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC16.74■□□□□ 0.27
CD74P04233 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CD74P04233 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD74P04233 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CD74P04233 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD74P04233 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC16.74■□□□□ 0.27
CD74P04233 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD74P04233 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC16.74■□□□□ 0.27
CD74P04233 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CD74P04233 AC007322.3-201ENST00000426526 701 ntBASIC16.74■□□□□ 0.27
CD74P04233 AC010141.2-201ENST00000452426 721 ntBASIC16.74■□□□□ 0.27
CD74P04233 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC16.74■□□□□ 0.27
CD74P04233 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD74P04233 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC16.74■□□□□ 0.27
CD74P04233 AL358852.1-201ENST00000623174 1268 ntBASIC16.74■□□□□ 0.27
CD74P04233 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD74P04233 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD74P04233 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CD74P04233 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD74P04233 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD74P04233 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD74P04233 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CD74P04233 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD74P04233 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD74P04233 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.73■□□□□ 0.27
CD74P04233 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD74P04233 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.73■□□□□ 0.27
CD74P04233 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CD74P04233 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CD74P04233 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC16.73■□□□□ 0.27
CD74P04233 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD74P04233 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD74P04233 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CD74P04233 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD74P04233 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.73■□□□□ 0.27
CD74P04233 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CD74P04233 AC091799.1-201ENST00000422823 811 ntBASIC16.73■□□□□ 0.27
CD74P04233 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC16.73■□□□□ 0.27
CD74P04233 AL356441.2-201ENST00000443009 864 ntBASIC16.73■□□□□ 0.27
CD74P04233 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CD74P04233 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD74P04233 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD74P04233 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CD74P04233 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD74P04233 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC16.73■□□□□ 0.27
CD74P04233 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.73■□□□□ 0.27
CD74P04233 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC16.73■□□□□ 0.27
CD74P04233 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CD74P04233 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD74P04233 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CD74P04233 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD74P04233 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CD74P04233 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.72■□□□□ 0.27
CD74P04233 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC16.72■□□□□ 0.27
CD74P04233 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD74P04233 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CD74P04233 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CD74P04233 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CD74P04233 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CD74P04233 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD74P04233 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CD74P04233 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD74P04233 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD74P04233 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CD74P04233 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CD74P04233 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CD74P04233 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC16.72■□□□□ 0.27
CD74P04233 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CD74P04233 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC16.72■□□□□ 0.27
CD74P04233 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC16.72■□□□□ 0.27
CD74P04233 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CD74P04233 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.72■□□□□ 0.27
CD74P04233 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC16.72■□□□□ 0.27
CD74P04233 AC027682.1-201ENST00000562846 899 ntBASIC16.72■□□□□ 0.27
CD74P04233 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC16.72■□□□□ 0.27
CD74P04233 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.72■□□□□ 0.27
CD74P04233 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.72■□□□□ 0.27
CD74P04233 AC079598.2-202ENST00000546624 1451 ntBASIC16.72■□□□□ 0.27
CD74P04233 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CD74P04233 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CD74P04233 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms