Protein–RNA interactions for Protein: P02406

RPL28, 60S ribosomal protein L28, yeastyeast

Known RBP Predictions only

Length 149 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL28P02406 snR49snR49 165 nt-1.17□□□□□ -2.6
RPL28P02406 YER181CYER181C 324 nt-1.18□□□□□ -2.6
RPL28P02406 YKL118WYKL118W 312 nt-1.19□□□□□ -2.6
RPL28P02406 YPR012WYPR012W 255 nt-1.19□□□□□ -2.6
RPL28P02406 tM(CAU)Q2tM(CAU)Q2 78 nt-1.21□□□□□ -2.6
RPL28P02406 YGR146C-AYGR146C-A 162 nt-1.21□□□□□ -2.6
RPL28P02406 YNL277W-AYNL277W-A 189 nt-1.22□□□□□ -2.6
RPL28P02406 RDS3YPR094W 324 nt-1.22□□□□□ -2.6
RPL28P02406 YNL266WYNL266W 420 nt-1.24□□□□□ -2.61
RPL28P02406 YEL014CYEL014C 306 nt-1.25□□□□□ -2.61
RPL28P02406 PMP2YEL017C-A 132 nt-1.25□□□□□ -2.61
RPL28P02406 GIM4YEL003W 336 nt-1.26□□□□□ -2.61
RPL28P02406 tP(UGG)QtP(UGG)Q 72 nt-1.27□□□□□ -2.61
RPL28P02406 snR39BsnR39B 96 nt-1.28□□□□□ -2.61
RPL28P02406 snR50snR50 90 nt-1.28□□□□□ -2.61
RPL28P02406 YBR131C-AYBR131C-A 90 nt-1.3□□□□□ -2.62
RPL28P02406 YFL019CYFL019C 354 nt-1.32□□□□□ -2.62
RPL28P02406 snR55snR55 98 nt-1.34□□□□□ -2.62
RPL28P02406 JLP2YMR132C 627 nt-1.37□□□□□ -2.63
RPL28P02406 YNL097C-BYNL097C-B 123 nt-1.37□□□□□ -2.63
RPL28P02406 YOR329W-AYOR329W-A 210 nt-1.4□□□□□ -2.63
RPL28P02406 snR67snR67 82 nt-1.43□□□□□ -2.64
RPL28P02406 tD(GUC)QtD(GUC)Q 75 nt-1.43□□□□□ -2.64
RPL28P02406 Q0144Q0144 330 nt-1.43□□□□□ -2.64
RPL28P02406 tY(GUA)QtY(GUA)Q 84 nt-1.46□□□□□ -2.64
RPL28P02406 SKI7YOR076C 2244 nt-1.47□□□□□ -2.65
RPL28P02406 YLR286W-AYLR286W-A 135 nt-1.48□□□□□ -2.65
RPL28P02406 YOL155W-AYOL155W-A 135 nt-1.5□□□□□ -2.65
RPL28P02406 YNL205CYNL205C 423 nt-1.52□□□□□ -2.65
RPL28P02406 snR48snR48 113 nt-1.52□□□□□ -2.65
RPL28P02406 snR65snR65 100 nt-1.57□□□□□ -2.66
RPL28P02406 YDL159C-BYDL159C-B 177 nt-1.57□□□□□ -2.66
RPL28P02406 YOR302WYOR302W 78 nt-1.57□□□□□ -2.66
RPL28P02406 YPL152W-AYPL152W-A 99 nt-1.58□□□□□ -2.66
RPL28P02406 YBR178WYBR178W 375 nt-1.58□□□□□ -2.66
RPL28P02406 YOR102WYOR102W 351 nt-1.67□□□□□ -2.68
RPL28P02406 tL(UAA)QtL(UAA)Q 85 nt-1.69□□□□□ -2.68
RPL28P02406 YML054C-AYML054C-A 159 nt-1.7□□□□□ -2.68
RPL28P02406 YGL188C-AYGL188C-A 141 nt-1.71□□□□□ -2.68
RPL28P02406 YBR126W-BYBR126W-B 144 nt-1.73□□□□□ -2.69
RPL28P02406 CDC65tQ(CUG)M 72 nt-1.74□□□□□ -2.69
RPL28P02406 YLR342W-AYLR342W-A 174 nt-1.74□□□□□ -2.69
RPL28P02406 snR77snR77 88 nt-1.78□□□□□ -2.69
RPL28P02406 YLR299C-AYLR299C-A 93 nt-1.78□□□□□ -2.69
RPL28P02406 snR52snR52 92 nt-1.78□□□□□ -2.69
RPL28P02406 YHR175W-AYHR175W-A 150 nt-1.79□□□□□ -2.7
RPL28P02406 YBR196C-AYBR196C-A 150 nt-1.84□□□□□ -2.7
RPL28P02406 YHL015W-AYHL015W-A 84 nt-1.85□□□□□ -2.71
RPL28P02406 YGR240C-AYGR240C-A 201 nt-1.86□□□□□ -2.71
RPL28P02406 tR(ACG)Q2tR(ACG)Q2 74 nt-1.9□□□□□ -2.71
RPL28P02406 YOR231C-AYOR231C-A 201 nt-1.91□□□□□ -2.72
RPL28P02406 snR81snR81 201 nt-1.92□□□□□ -2.72
RPL28P02406 snR56snR56 88 nt-1.93□□□□□ -2.72
RPL28P02406 snR80snR80 171 nt-1.96□□□□□ -2.72
RPL28P02406 YMR315W-AYMR315W-A 108 nt-1.96□□□□□ -2.72
RPL28P02406 YNL198CYNL198C 303 nt-1.98□□□□□ -2.73
RPL28P02406 YOR376W-AYOR376W-A 156 nt-2.06□□□□□ -2.74
RPL28P02406 YHR180C-BYHR180C-B 105 nt-2.1□□□□□ -2.75
RPL28P02406 YDR543CYDR543C 300 nt-2.12□□□□□ -2.75
RPL28P02406 YDR524W-CYDR524W-C 90 nt-2.14□□□□□ -2.75
RPL28P02406 YDR406W-AYDR406W-A 246 nt-2.15□□□□□ -2.75
RPL28P02406 YJL150WYJL150W 303 nt-2.17□□□□□ -2.76
RPL28P02406 SOM1YEL059C-A 225 nt-2.18□□□□□ -2.76
RPL28P02406 YOR309CYOR309C 381 nt-2.19□□□□□ -2.76
RPL28P02406 YOR316C-AYOR316C-A 210 nt-2.22□□□□□ -2.76
RPL28P02406 YCR095W-AYCR095W-A 159 nt-2.26□□□□□ -2.77
RPL28P02406 YKL106C-AYKL106C-A 120 nt-2.29□□□□□ -2.78
RPL28P02406 YBL053WYBL053W 375 nt-2.31□□□□□ -2.78
RPL28P02406 YOL166W-AYOL166W-A 156 nt-2.39□□□□□ -2.79
RPL28P02406 YBR109W-AYBR109W-A 225 nt-2.39□□□□□ -2.79
RPL28P02406 YBR296C-AYBR296C-A 120 nt-2.41□□□□□ -2.8
RPL28P02406 RPL41AYDL184C 78 nt-2.46□□□□□ -2.8
RPL28P02406 Q0142Q0142 177 nt-2.48□□□□□ -2.81
RPL28P02406 YMR046W-AYMR046W-A 129 nt-2.48□□□□□ -2.81
RPL28P02406 YGR151CYGR151C 336 nt-2.55□□□□□ -2.82
RPL28P02406 YOL083C-AYOL083C-A 141 nt-2.58□□□□□ -2.82
RPL28P02406 snR38snR38 95 nt-2.58□□□□□ -2.82
RPL28P02406 YBL071C-BYBL071C-B 99 nt-2.6□□□□□ -2.83
RPL28P02406 YOL164W-AYOL164W-A 183 nt-2.66□□□□□ -2.84
RPL28P02406 snR6snR6 112 nt-2.7□□□□□ -2.84
RPL28P02406 SPG3YDR504C 384 nt-2.72□□□□□ -2.84
RPL28P02406 YAL037C-AYAL037C-A 93 nt-2.72□□□□□ -2.84
RPL28P02406 YCL001W-BYCL001W-B 255 nt-2.8□□□□□ -2.86
RPL28P02406 tM(CAU)Q1tM(CAU)Q1 76 nt-2.82□□□□□ -2.86
RPL28P02406 snR47snR47 99 nt-2.82□□□□□ -2.86
RPL28P02406 YBL100W-CYBL100W-C 120 nt-2.84□□□□□ -2.86
RPL28P02406 snR73snR73 106 nt-2.87□□□□□ -2.87
RPL28P02406 YOR335W-AYOR335W-A 81 nt-2.87□□□□□ -2.87
RPL28P02406 YLR466C-BYLR466C-B 117 nt-2.94□□□□□ -2.88
RPL28P02406 YJR162CYJR162C 351 nt-2.97□□□□□ -2.88
RPL28P02406 YNL337WYNL337W 255 nt-2.97□□□□□ -2.88
RPL28P02406 RPL41BYDL133C-A 78 nt-3.06□□□□□ -2.9
RPL28P02406 YKL225WYKL225W 348 nt-3.08□□□□□ -2.9
RPL28P02406 YNL338WYNL338W 159 nt-3.12□□□□□ -2.91
RPL28P02406 tV(UAC)QtV(UAC)Q 76 nt-3.14□□□□□ -2.91
RPL28P02406 YDL114W-AYDL114W-A 114 nt-3.16□□□□□ -2.92
RPL28P02406 tS(GCU)Q1tS(GCU)Q1 86 nt-3.16□□□□□ -2.92
RPL28P02406 YDR524C-AYDR524C-A 120 nt-3.22□□□□□ -2.92
RPL28P02406 snR85snR85 171 nt-3.28□□□□□ -2.93
RPL28P02406 YGL041C-BYGL041C-B 183 nt-3.42□□□□□ -2.96
Retrieved 100 of 7,029 protein–RNA pairs in 12.8 ms