Protein–RNA interactions for Protein: P00546

CDC28, Cyclin-dependent kinase 1, yeastyeast

Known RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC28P00546 YNL277W-AYNL277W-A 189 nt-1.01□□□□□ -2.57
CDC28P00546 YOR170WYOR170W 306 nt-1.02□□□□□ -2.57
CDC28P00546 snR49snR49 165 nt-1.02□□□□□ -2.57
CDC28P00546 YEL014CYEL014C 306 nt-1.04□□□□□ -2.58
CDC28P00546 YER090C-AYER090C-A 90 nt-1.04□□□□□ -2.58
CDC28P00546 YFL019CYFL019C 354 nt-1.05□□□□□ -2.58
CDC28P00546 YGR146C-AYGR146C-A 162 nt-1.06□□□□□ -2.58
CDC28P00546 Q0144Q0144 330 nt-1.06□□□□□ -2.58
CDC28P00546 RDS3YPR094W 324 nt-1.07□□□□□ -2.58
CDC28P00546 snR39BsnR39B 96 nt-1.08□□□□□ -2.58
CDC28P00546 PMP2YEL017C-A 132 nt-1.09□□□□□ -2.58
CDC28P00546 YBR131C-AYBR131C-A 90 nt-1.09□□□□□ -2.58
CDC28P00546 snR55snR55 98 nt-1.1□□□□□ -2.59
CDC28P00546 YNL266WYNL266W 420 nt-1.11□□□□□ -2.59
CDC28P00546 snR50snR50 90 nt-1.13□□□□□ -2.59
CDC28P00546 snR161snR161 161 nt-1.15□□□□□ -2.59
CDC28P00546 YOR329W-AYOR329W-A 210 nt-1.2□□□□□ -2.6
CDC28P00546 YNL097C-BYNL097C-B 123 nt-1.21□□□□□ -2.6
CDC28P00546 YBR223W-AYBR223W-A 120 nt-1.21□□□□□ -2.6
CDC28P00546 YNR077CYNR077C 255 nt-1.22□□□□□ -2.6
CDC28P00546 YOL155W-AYOL155W-A 135 nt-1.24□□□□□ -2.61
CDC28P00546 snR67snR67 82 nt-1.25□□□□□ -2.61
CDC28P00546 tD(GUC)QtD(GUC)Q 75 nt-1.26□□□□□ -2.61
CDC28P00546 JLP2YMR132C 627 nt-1.26□□□□□ -2.61
CDC28P00546 snR65snR65 100 nt-1.3□□□□□ -2.62
CDC28P00546 tP(UGG)QtP(UGG)Q 72 nt-1.3□□□□□ -2.62
CDC28P00546 YLR286W-AYLR286W-A 135 nt-1.31□□□□□ -2.62
CDC28P00546 YNL205CYNL205C 423 nt-1.32□□□□□ -2.62
CDC28P00546 YPL152W-AYPL152W-A 99 nt-1.33□□□□□ -2.62
CDC28P00546 snR48snR48 113 nt-1.35□□□□□ -2.63
CDC28P00546 YOR302WYOR302W 78 nt-1.36□□□□□ -2.63
CDC28P00546 YBR178WYBR178W 375 nt-1.37□□□□□ -2.63
CDC28P00546 YDL159C-BYDL159C-B 177 nt-1.38□□□□□ -2.63
CDC28P00546 SKI7YOR076C 2244 nt-1.4□□□□□ -2.63
CDC28P00546 YHR175W-AYHR175W-A 150 nt-1.41□□□□□ -2.64
CDC28P00546 YOR102WYOR102W 351 nt-1.44□□□□□ -2.64
CDC28P00546 YGL188C-AYGL188C-A 141 nt-1.45□□□□□ -2.64
CDC28P00546 YLR342W-AYLR342W-A 174 nt-1.46□□□□□ -2.64
CDC28P00546 snR52snR52 92 nt-1.49□□□□□ -2.65
CDC28P00546 tL(UAA)QtL(UAA)Q 85 nt-1.5□□□□□ -2.65
CDC28P00546 snR56snR56 88 nt-1.55□□□□□ -2.66
CDC28P00546 YHL015W-AYHL015W-A 84 nt-1.55□□□□□ -2.66
CDC28P00546 tR(ACG)Q2tR(ACG)Q2 74 nt-1.55□□□□□ -2.66
CDC28P00546 YML054C-AYML054C-A 159 nt-1.55□□□□□ -2.66
CDC28P00546 YLR299C-AYLR299C-A 93 nt-1.57□□□□□ -2.66
CDC28P00546 YBR196C-AYBR196C-A 150 nt-1.6□□□□□ -2.67
CDC28P00546 tY(GUA)QtY(GUA)Q 84 nt-1.61□□□□□ -2.67
CDC28P00546 YOR231C-AYOR231C-A 201 nt-1.62□□□□□ -2.67
CDC28P00546 snR80snR80 171 nt-1.68□□□□□ -2.68
CDC28P00546 YGR240C-AYGR240C-A 201 nt-1.71□□□□□ -2.68
CDC28P00546 CDC65tQ(CUG)M 72 nt-1.74□□□□□ -2.69
CDC28P00546 YDR524W-CYDR524W-C 90 nt-1.76□□□□□ -2.69
CDC28P00546 YNL198CYNL198C 303 nt-1.77□□□□□ -2.69
CDC28P00546 YDR406W-AYDR406W-A 246 nt-1.8□□□□□ -2.7
CDC28P00546 snR77snR77 88 nt-1.82□□□□□ -2.7
CDC28P00546 snR81snR81 201 nt-1.84□□□□□ -2.7
CDC28P00546 YHR180C-BYHR180C-B 105 nt-1.84□□□□□ -2.7
CDC28P00546 YMR315W-AYMR315W-A 108 nt-1.89□□□□□ -2.71
CDC28P00546 YOR376W-AYOR376W-A 156 nt-1.89□□□□□ -2.71
CDC28P00546 SOM1YEL059C-A 225 nt-1.9□□□□□ -2.71
CDC28P00546 YJL150WYJL150W 303 nt-1.94□□□□□ -2.72
CDC28P00546 YCR095W-AYCR095W-A 159 nt-1.98□□□□□ -2.73
CDC28P00546 YBL053WYBL053W 375 nt-2.04□□□□□ -2.74
CDC28P00546 YOR316C-AYOR316C-A 210 nt-2.04□□□□□ -2.74
CDC28P00546 YKL106C-AYKL106C-A 120 nt-2.05□□□□□ -2.74
CDC28P00546 YMR046W-AYMR046W-A 129 nt-2.14□□□□□ -2.75
CDC28P00546 YBR296C-AYBR296C-A 120 nt-2.16□□□□□ -2.76
CDC28P00546 RPL41AYDL184C 78 nt-2.19□□□□□ -2.76
CDC28P00546 YBR109W-AYBR109W-A 225 nt-2.19□□□□□ -2.76
CDC28P00546 YBR126W-BYBR126W-B 144 nt-2.19□□□□□ -2.76
CDC28P00546 YOR309CYOR309C 381 nt-2.24□□□□□ -2.77
CDC28P00546 YGR151CYGR151C 336 nt-2.26□□□□□ -2.77
CDC28P00546 YOL083C-AYOL083C-A 141 nt-2.3□□□□□ -2.78
CDC28P00546 SPG3YDR504C 384 nt-2.35□□□□□ -2.79
CDC28P00546 YBL071C-BYBL071C-B 99 nt-2.35□□□□□ -2.79
CDC28P00546 snR38snR38 95 nt-2.38□□□□□ -2.79
CDC28P00546 YOL164W-AYOL164W-A 183 nt-2.39□□□□□ -2.79
CDC28P00546 tM(CAU)Q1tM(CAU)Q1 76 nt-2.43□□□□□ -2.8
CDC28P00546 YAL037C-AYAL037C-A 93 nt-2.44□□□□□ -2.8
CDC28P00546 YCL001W-BYCL001W-B 255 nt-2.47□□□□□ -2.8
CDC28P00546 YBL100W-CYBL100W-C 120 nt-2.49□□□□□ -2.81
CDC28P00546 snR47snR47 99 nt-2.51□□□□□ -2.81
CDC28P00546 Q0142Q0142 177 nt-2.53□□□□□ -2.81
CDC28P00546 YLR466C-BYLR466C-B 117 nt-2.57□□□□□ -2.82
CDC28P00546 snR6snR6 112 nt-2.66□□□□□ -2.84
CDC28P00546 YNL338WYNL338W 159 nt-2.71□□□□□ -2.84
CDC28P00546 YNL337WYNL337W 255 nt-2.72□□□□□ -2.84
CDC28P00546 RPL41BYDL133C-A 78 nt-2.76□□□□□ -2.85
CDC28P00546 YDR543CYDR543C 300 nt-2.78□□□□□ -2.85
CDC28P00546 YKL225WYKL225W 348 nt-2.78□□□□□ -2.85
CDC28P00546 YOR335W-AYOR335W-A 81 nt-2.79□□□□□ -2.86
CDC28P00546 tS(GCU)Q1tS(GCU)Q1 86 nt-2.85□□□□□ -2.87
CDC28P00546 snR73snR73 106 nt-2.86□□□□□ -2.87
CDC28P00546 YDL114W-AYDL114W-A 114 nt-2.87□□□□□ -2.87
CDC28P00546 tV(UAC)QtV(UAC)Q 76 nt-2.91□□□□□ -2.88
CDC28P00546 snR85snR85 171 nt-2.98□□□□□ -2.89
CDC28P00546 YOL166W-AYOL166W-A 156 nt-2.98□□□□□ -2.89
CDC28P00546 YGL041C-BYGL041C-B 183 nt-3.03□□□□□ -2.89
CDC28P00546 Q0032Q0032 291 nt-3.09□□□□□ -2.9
CDC28P00546 YDR034C-AYDR034C-A 177 nt-3.1□□□□□ -2.91
Retrieved 100 of 7,029 protein–RNA pairs in 32.6 ms