Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 AC026185.1-201ENST00000445748 174 ntBASIC20.03■□□□□ 0.8
VAPBO95292 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.03■□□□□ 0.8
VAPBO95292 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.03■□□□□ 0.8
VAPBO95292 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.03■□□□□ 0.8
VAPBO95292 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.03■□□□□ 0.8
VAPBO95292 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.03■□□□□ 0.8
VAPBO95292 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VAPBO95292 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VAPBO95292 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
VAPBO95292 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VAPBO95292 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
VAPBO95292 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VAPBO95292 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
VAPBO95292 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VAPBO95292 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
VAPBO95292 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
VAPBO95292 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.02■□□□□ 0.8
VAPBO95292 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VAPBO95292 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
VAPBO95292 C2orf69P4-201ENST00000565394 541 ntBASIC20.02■□□□□ 0.8
VAPBO95292 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.02■□□□□ 0.8
VAPBO95292 RAP2CP1-201ENST00000605103 478 ntBASIC20.02■□□□□ 0.8
VAPBO95292 AL031963.3-201ENST00000606441 850 ntBASIC20.02■□□□□ 0.8
VAPBO95292 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
VAPBO95292 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
VAPBO95292 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VAPBO95292 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.02■□□□□ 0.8
VAPBO95292 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
VAPBO95292 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.02■□□□□ 0.79
VAPBO95292 TMEM179-206ENST00000616017 1645 ntBASIC20.02■□□□□ 0.79
VAPBO95292 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.02■□□□□ 0.79
VAPBO95292 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
VAPBO95292 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VAPBO95292 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VAPBO95292 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.01■□□□□ 0.79
VAPBO95292 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VAPBO95292 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VAPBO95292 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
VAPBO95292 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
VAPBO95292 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VAPBO95292 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
VAPBO95292 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VAPBO95292 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.01■□□□□ 0.79
VAPBO95292 MIR663A-201ENST00000385250 93 ntBASIC20.01■□□□□ 0.79
VAPBO95292 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.01■□□□□ 0.79
VAPBO95292 AF201337.1-201ENST00000520239 748 ntBASIC20.01■□□□□ 0.79
VAPBO95292 AC105036.2-201ENST00000569468 176 ntBASIC20.01■□□□□ 0.79
VAPBO95292 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VAPBO95292 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.01■□□□□ 0.79
VAPBO95292 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
VAPBO95292 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.01■□□□□ 0.79
VAPBO95292 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
VAPBO95292 KRT8P20-201ENST00000423953 1409 ntBASIC20.01■□□□□ 0.79
VAPBO95292 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
VAPBO95292 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VAPBO95292 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VAPBO95292 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
VAPBO95292 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
VAPBO95292 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VAPBO95292 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20■□□□□ 0.79
VAPBO95292 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20■□□□□ 0.79
VAPBO95292 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20■□□□□ 0.79
VAPBO95292 LSM12P1-201ENST00000411836 588 ntBASIC20■□□□□ 0.79
VAPBO95292 CROCCP5-201ENST00000436658 830 ntBASIC20■□□□□ 0.79
VAPBO95292 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20■□□□□ 0.79
VAPBO95292 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20■□□□□ 0.79
VAPBO95292 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VAPBO95292 MKRN4P-201ENST00000444706 1521 ntBASIC20■□□□□ 0.79
VAPBO95292 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VAPBO95292 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20■□□□□ 0.79
VAPBO95292 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VAPBO95292 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VAPBO95292 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
VAPBO95292 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
VAPBO95292 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
VAPBO95292 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VAPBO95292 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VAPBO95292 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
VAPBO95292 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
VAPBO95292 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VAPBO95292 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
VAPBO95292 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.99■□□□□ 0.79
VAPBO95292 AL158211.5-201ENST00000623583 2518 ntBASIC19.99■□□□□ 0.79
VAPBO95292 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.99■□□□□ 0.79
VAPBO95292 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
VAPBO95292 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.99■□□□□ 0.79
VAPBO95292 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
VAPBO95292 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.99■□□□□ 0.79
VAPBO95292 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.99■□□□□ 0.79
VAPBO95292 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.99■□□□□ 0.79
VAPBO95292 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.99■□□□□ 0.79
VAPBO95292 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VAPBO95292 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.99■□□□□ 0.79
VAPBO95292 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.98■□□□□ 0.79
VAPBO95292 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
VAPBO95292 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
VAPBO95292 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.98■□□□□ 0.79
VAPBO95292 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.98■□□□□ 0.79
VAPBO95292 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
VAPBO95292 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms