Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.01■□□□□ 0.47
SSX4O60224 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.01■□□□□ 0.47
SSX4O60224 KRT18P20-201ENST00000548986 1279 ntBASIC18.01■□□□□ 0.47
SSX4O60224 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.01■□□□□ 0.47
SSX4O60224 AL138781.1-201ENST00000566567 1274 ntBASIC18.01■□□□□ 0.47
SSX4O60224 AC010536.3-201ENST00000620306 533 ntBASIC18.01■□□□□ 0.47
SSX4O60224 TMEM191A-211ENST00000637163 1067 ntBASIC18.01■□□□□ 0.47
SSX4O60224 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
SSX4O60224 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.01■□□□□ 0.47
SSX4O60224 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SSX4O60224 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SSX4O60224 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SSX4O60224 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SSX4O60224 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18■□□□□ 0.47
SSX4O60224 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18■□□□□ 0.47
SSX4O60224 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SSX4O60224 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18■□□□□ 0.47
SSX4O60224 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SSX4O60224 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SSX4O60224 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
SSX4O60224 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SSX4O60224 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SSX4O60224 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18■□□□□ 0.47
SSX4O60224 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SSX4O60224 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
SSX4O60224 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
SSX4O60224 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18■□□□□ 0.47
SSX4O60224 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SSX4O60224 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
SSX4O60224 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18■□□□□ 0.47
SSX4O60224 AF201337.1-201ENST00000520239 748 ntBASIC18■□□□□ 0.47
SSX4O60224 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18■□□□□ 0.47
SSX4O60224 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
SSX4O60224 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SSX4O60224 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18■□□□□ 0.47
SSX4O60224 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
SSX4O60224 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SSX4O60224 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SSX4O60224 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18■□□□□ 0.47
SSX4O60224 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18■□□□□ 0.47
SSX4O60224 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SSX4O60224 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SSX4O60224 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
SSX4O60224 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.99■□□□□ 0.47
SSX4O60224 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.99■□□□□ 0.47
SSX4O60224 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.99■□□□□ 0.47
SSX4O60224 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SSX4O60224 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SSX4O60224 GUSBP6-202ENST00000438529 1198 ntBASIC17.99■□□□□ 0.47
SSX4O60224 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SSX4O60224 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
SSX4O60224 AC105036.2-201ENST00000569468 176 ntBASIC17.99■□□□□ 0.47
SSX4O60224 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.99■□□□□ 0.47
SSX4O60224 AC007225.1-201ENST00000566331 1836 ntBASIC17.99■□□□□ 0.47
SSX4O60224 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.99■□□□□ 0.47
SSX4O60224 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.99■□□□□ 0.47
SSX4O60224 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SSX4O60224 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SSX4O60224 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.98■□□□□ 0.47
SSX4O60224 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
SSX4O60224 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SSX4O60224 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SSX4O60224 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SSX4O60224 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.98■□□□□ 0.47
SSX4O60224 TSPY20P-201ENST00000450910 630 ntBASIC17.98■□□□□ 0.47
SSX4O60224 KRT18P6-201ENST00000555540 1265 ntBASIC17.98■□□□□ 0.47
SSX4O60224 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SSX4O60224 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.98■□□□□ 0.47
SSX4O60224 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.98■□□□□ 0.47
SSX4O60224 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.98■□□□□ 0.47
SSX4O60224 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.98■□□□□ 0.47
SSX4O60224 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.98■□□□□ 0.47
SSX4O60224 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SSX4O60224 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SSX4O60224 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SSX4O60224 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SSX4O60224 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SSX4O60224 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SSX4O60224 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SSX4O60224 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
SSX4O60224 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
SSX4O60224 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.98■□□□□ 0.47
SSX4O60224 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SSX4O60224 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SSX4O60224 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.97■□□□□ 0.47
SSX4O60224 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SSX4O60224 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.97■□□□□ 0.47
SSX4O60224 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SSX4O60224 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SSX4O60224 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SSX4O60224 CNN2P6-201ENST00000439038 900 ntBASIC17.97■□□□□ 0.47
SSX4O60224 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SSX4O60224 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.97■□□□□ 0.47
SSX4O60224 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.97■□□□□ 0.47
SSX4O60224 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.97■□□□□ 0.47
SSX4O60224 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.97■□□□□ 0.47
SSX4O60224 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SSX4O60224 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SSX4O60224 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SSX4O60224 TCF3P1-201ENST00000423021 1937 ntBASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms