Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.19■□□□□ 0.66
SLC28A2O43868 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
SLC28A2O43868 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC28A2O43868 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
SLC28A2O43868 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC28A2O43868 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC28A2O43868 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC28A2O43868 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC28A2O43868 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC28A2O43868 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC28A2O43868 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC28A2O43868 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC28A2O43868 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SLC28A2O43868 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC28A2O43868 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC28A2O43868 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SLC28A2O43868 AC087499.1-201ENST00000418141 1075 ntBASIC19.18■□□□□ 0.66
SLC28A2O43868 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC28A2O43868 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC28A2O43868 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.18■□□□□ 0.66
SLC28A2O43868 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.18■□□□□ 0.66
SLC28A2O43868 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC28A2O43868 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC28A2O43868 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC28A2O43868 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC28A2O43868 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC28A2O43868 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC28A2O43868 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC28A2O43868 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
SLC28A2O43868 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC28A2O43868 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC28A2O43868 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC28A2O43868 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC28A2O43868 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SLC28A2O43868 TMPOP1-202ENST00000424642 1267 ntBASIC19.17■□□□□ 0.66
SLC28A2O43868 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC28A2O43868 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.17■□□□□ 0.66
SLC28A2O43868 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC28A2O43868 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC28A2O43868 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC28A2O43868 AL162412.1-201ENST00000567129 965 ntBASIC19.17■□□□□ 0.66
SLC28A2O43868 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC28A2O43868 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC28A2O43868 HLA-B-256ENST00000639848 1089 ntBASIC19.17■□□□□ 0.66
SLC28A2O43868 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
SLC28A2O43868 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC28A2O43868 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC28A2O43868 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.17■□□□□ 0.66
SLC28A2O43868 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SLC28A2O43868 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC28A2O43868 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC28A2O43868 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC28A2O43868 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLC28A2O43868 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.16■□□□□ 0.66
SLC28A2O43868 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SLC28A2O43868 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SLC28A2O43868 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
SLC28A2O43868 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
SLC28A2O43868 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC28A2O43868 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC28A2O43868 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLC28A2O43868 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLC28A2O43868 AC012618.2-201ENST00000428058 849 ntBASIC19.16■□□□□ 0.66
SLC28A2O43868 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.16■□□□□ 0.66
SLC28A2O43868 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.16■□□□□ 0.66
SLC28A2O43868 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC28A2O43868 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLC28A2O43868 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC28A2O43868 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC28A2O43868 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
SLC28A2O43868 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.16■□□□□ 0.66
SLC28A2O43868 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLC28A2O43868 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC28A2O43868 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SLC28A2O43868 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SLC28A2O43868 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC28A2O43868 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC28A2O43868 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.15■□□□□ 0.66
SLC28A2O43868 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.15■□□□□ 0.66
SLC28A2O43868 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
SLC28A2O43868 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC28A2O43868 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC28A2O43868 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC28A2O43868 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC28A2O43868 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.15■□□□□ 0.66
SLC28A2O43868 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC28A2O43868 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.15■□□□□ 0.66
SLC28A2O43868 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
SLC28A2O43868 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
SLC28A2O43868 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
SLC28A2O43868 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.14■□□□□ 0.66
SLC28A2O43868 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SLC28A2O43868 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC28A2O43868 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC28A2O43868 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SLC28A2O43868 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.65
SLC28A2O43868 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.14■□□□□ 0.65
SLC28A2O43868 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.14■□□□□ 0.65
SLC28A2O43868 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.14■□□□□ 0.65
SLC28A2O43868 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms