Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
XRCC2O43543 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
XRCC2O43543 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
XRCC2O43543 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
XRCC2O43543 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
XRCC2O43543 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
XRCC2O43543 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
XRCC2O43543 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.31■□□□□ 0.36
XRCC2O43543 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
XRCC2O43543 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
XRCC2O43543 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.31■□□□□ 0.36
XRCC2O43543 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.31■□□□□ 0.36
XRCC2O43543 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
XRCC2O43543 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
XRCC2O43543 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
XRCC2O43543 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
XRCC2O43543 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.31■□□□□ 0.36
XRCC2O43543 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.31■□□□□ 0.36
XRCC2O43543 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
XRCC2O43543 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
XRCC2O43543 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
XRCC2O43543 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
XRCC2O43543 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
XRCC2O43543 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
XRCC2O43543 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
XRCC2O43543 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.3■□□□□ 0.36
XRCC2O43543 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
XRCC2O43543 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.3■□□□□ 0.36
XRCC2O43543 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
XRCC2O43543 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
XRCC2O43543 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.3■□□□□ 0.36
XRCC2O43543 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
XRCC2O43543 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
XRCC2O43543 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.3■□□□□ 0.36
XRCC2O43543 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.3■□□□□ 0.36
XRCC2O43543 RAP2CP1-201ENST00000605103 478 ntBASIC17.3■□□□□ 0.36
XRCC2O43543 AL050303.2-201ENST00000619798 666 ntBASIC17.3■□□□□ 0.36
XRCC2O43543 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
XRCC2O43543 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.3■□□□□ 0.36
XRCC2O43543 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
XRCC2O43543 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
XRCC2O43543 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
XRCC2O43543 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
XRCC2O43543 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
XRCC2O43543 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
XRCC2O43543 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
XRCC2O43543 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.3■□□□□ 0.36
XRCC2O43543 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
XRCC2O43543 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
XRCC2O43543 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.29■□□□□ 0.36
XRCC2O43543 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.29■□□□□ 0.36
XRCC2O43543 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
XRCC2O43543 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
XRCC2O43543 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
XRCC2O43543 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
XRCC2O43543 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
XRCC2O43543 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
XRCC2O43543 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.29■□□□□ 0.36
XRCC2O43543 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
XRCC2O43543 AC006970.2-201ENST00000450065 779 ntBASIC17.29■□□□□ 0.36
XRCC2O43543 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
XRCC2O43543 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.29■□□□□ 0.36
XRCC2O43543 AC023632.3-201ENST00000521633 145 ntBASIC17.29■□□□□ 0.36
XRCC2O43543 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.29■□□□□ 0.36
XRCC2O43543 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.29■□□□□ 0.36
XRCC2O43543 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.29■□□□□ 0.36
XRCC2O43543 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.29■□□□□ 0.36
XRCC2O43543 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.29■□□□□ 0.36
XRCC2O43543 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.29■□□□□ 0.36
XRCC2O43543 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.29■□□□□ 0.36
XRCC2O43543 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
XRCC2O43543 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.29■□□□□ 0.36
XRCC2O43543 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
XRCC2O43543 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
XRCC2O43543 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.29■□□□□ 0.36
XRCC2O43543 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
XRCC2O43543 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
XRCC2O43543 TMEM179-206ENST00000616017 1645 ntBASIC17.29■□□□□ 0.36
XRCC2O43543 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
XRCC2O43543 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
XRCC2O43543 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
XRCC2O43543 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
XRCC2O43543 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
XRCC2O43543 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.28■□□□□ 0.36
XRCC2O43543 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
XRCC2O43543 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.28■□□□□ 0.36
XRCC2O43543 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
XRCC2O43543 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
XRCC2O43543 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
XRCC2O43543 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
XRCC2O43543 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.28■□□□□ 0.36
XRCC2O43543 CROCCP5-201ENST00000436658 830 ntBASIC17.28■□□□□ 0.36
XRCC2O43543 AL121832.2-201ENST00000610979 668 ntBASIC17.28■□□□□ 0.36
XRCC2O43543 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
XRCC2O43543 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
XRCC2O43543 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
XRCC2O43543 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
XRCC2O43543 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
XRCC2O43543 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
XRCC2O43543 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms