Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM49BA6NDI0 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.97■■□□□ 1.11
TRIM49BA6NDI0 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
TRIM49BA6NDI0 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.97■■□□□ 1.11
TRIM49BA6NDI0 AL512625.2-201ENST00000417533 625 ntBASIC21.97■■□□□ 1.11
TRIM49BA6NDI0 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.97■■□□□ 1.11
TRIM49BA6NDI0 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.97■■□□□ 1.11
TRIM49BA6NDI0 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.97■■□□□ 1.11
TRIM49BA6NDI0 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.97■■□□□ 1.11
TRIM49BA6NDI0 AL589743.5-201ENST00000616611 1050 ntBASIC21.97■■□□□ 1.11
TRIM49BA6NDI0 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM49BA6NDI0 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.97■■□□□ 1.11
TRIM49BA6NDI0 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
TRIM49BA6NDI0 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.97■■□□□ 1.11
TRIM49BA6NDI0 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM49BA6NDI0 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM49BA6NDI0 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM49BA6NDI0 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.97■■□□□ 1.11
TRIM49BA6NDI0 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM49BA6NDI0 KRT8P20-201ENST00000423953 1409 ntBASIC21.97■■□□□ 1.11
TRIM49BA6NDI0 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM49BA6NDI0 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
TRIM49BA6NDI0 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM49BA6NDI0 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.96■■□□□ 1.11
TRIM49BA6NDI0 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM49BA6NDI0 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.96■■□□□ 1.11
TRIM49BA6NDI0 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.96■■□□□ 1.11
TRIM49BA6NDI0 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM49BA6NDI0 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.96■■□□□ 1.11
TRIM49BA6NDI0 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.96■■□□□ 1.11
TRIM49BA6NDI0 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.96■■□□□ 1.11
TRIM49BA6NDI0 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM49BA6NDI0 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM49BA6NDI0 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM49BA6NDI0 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.96■■□□□ 1.11
TRIM49BA6NDI0 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.96■■□□□ 1.11
TRIM49BA6NDI0 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM49BA6NDI0 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.96■■□□□ 1.11
TRIM49BA6NDI0 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM49BA6NDI0 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
TRIM49BA6NDI0 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM49BA6NDI0 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.95■■□□□ 1.1
TRIM49BA6NDI0 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
TRIM49BA6NDI0 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM49BA6NDI0 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM49BA6NDI0 MIR663A-201ENST00000385250 93 ntBASIC21.95■■□□□ 1.1
TRIM49BA6NDI0 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.95■■□□□ 1.1
TRIM49BA6NDI0 C2orf69P4-201ENST00000565394 541 ntBASIC21.95■■□□□ 1.1
TRIM49BA6NDI0 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.95■■□□□ 1.1
TRIM49BA6NDI0 RAP2CP1-201ENST00000605103 478 ntBASIC21.95■■□□□ 1.1
TRIM49BA6NDI0 AL137784.2-201ENST00000607332 1000 ntBASIC21.95■■□□□ 1.1
TRIM49BA6NDI0 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.95■■□□□ 1.1
TRIM49BA6NDI0 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.95■■□□□ 1.1
TRIM49BA6NDI0 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM49BA6NDI0 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM49BA6NDI0 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM49BA6NDI0 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM49BA6NDI0 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM49BA6NDI0 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
TRIM49BA6NDI0 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM49BA6NDI0 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM49BA6NDI0 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM49BA6NDI0 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM49BA6NDI0 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM49BA6NDI0 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.94■■□□□ 1.1
TRIM49BA6NDI0 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM49BA6NDI0 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.94■■□□□ 1.1
TRIM49BA6NDI0 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.94■■□□□ 1.1
TRIM49BA6NDI0 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM49BA6NDI0 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.94■■□□□ 1.1
TRIM49BA6NDI0 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM49BA6NDI0 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.94■■□□□ 1.1
TRIM49BA6NDI0 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM49BA6NDI0 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM49BA6NDI0 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM49BA6NDI0 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.94■■□□□ 1.1
TRIM49BA6NDI0 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.94■■□□□ 1.1
TRIM49BA6NDI0 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.94■■□□□ 1.1
TRIM49BA6NDI0 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM49BA6NDI0 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
TRIM49BA6NDI0 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM49BA6NDI0 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRIM49BA6NDI0 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.93■■□□□ 1.1
TRIM49BA6NDI0 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TRIM49BA6NDI0 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRIM49BA6NDI0 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRIM49BA6NDI0 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRIM49BA6NDI0 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRIM49BA6NDI0 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.93■■□□□ 1.1
TRIM49BA6NDI0 AC133552.2-202ENST00000575694 574 ntBASIC21.93■■□□□ 1.1
TRIM49BA6NDI0 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRIM49BA6NDI0 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.93■■□□□ 1.1
TRIM49BA6NDI0 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.93■■□□□ 1.1
TRIM49BA6NDI0 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRIM49BA6NDI0 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRIM49BA6NDI0 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM49BA6NDI0 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM49BA6NDI0 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM49BA6NDI0 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM49BA6NDI0 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms