Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 AL024507.2-201ENST00000606070 2574 ntBASIC27.19■■□□□ 1.94
SBNO1A3KN83 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SBNO1A3KN83 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SBNO1A3KN83 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SBNO1A3KN83 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SBNO1A3KN83 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC27.19■■□□□ 1.94
SBNO1A3KN83 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
SBNO1A3KN83 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC27.19■■□□□ 1.94
SBNO1A3KN83 ISCU-203ENST00000431221 799 ntTSL 2 BASIC27.19■■□□□ 1.94
SBNO1A3KN83 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC27.19■■□□□ 1.94
SBNO1A3KN83 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC27.19■■□□□ 1.94
SBNO1A3KN83 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC27.19■■□□□ 1.94
SBNO1A3KN83 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
SBNO1A3KN83 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC27.18■■□□□ 1.94
SBNO1A3KN83 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
SBNO1A3KN83 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
SBNO1A3KN83 AL049796.1-201ENST00000565336 1766 ntBASIC27.18■■□□□ 1.94
SBNO1A3KN83 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC27.18■■□□□ 1.94
SBNO1A3KN83 EP400NL-214ENST00000641289 2402 ntBASIC27.18■■□□□ 1.94
SBNO1A3KN83 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
SBNO1A3KN83 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SBNO1A3KN83 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SBNO1A3KN83 CALM3-202ENST00000391918 702 ntTSL 2 BASIC27.18■■□□□ 1.94
SBNO1A3KN83 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
SBNO1A3KN83 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC27.18■■□□□ 1.94
SBNO1A3KN83 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SBNO1A3KN83 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC27.17■■□□□ 1.94
SBNO1A3KN83 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC27.17■■□□□ 1.94
SBNO1A3KN83 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
SBNO1A3KN83 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC27.17■■□□□ 1.94
SBNO1A3KN83 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC27.17■■□□□ 1.94
SBNO1A3KN83 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
SBNO1A3KN83 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
SBNO1A3KN83 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
SBNO1A3KN83 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC27.16■■□□□ 1.94
SBNO1A3KN83 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC27.16■■□□□ 1.94
SBNO1A3KN83 KRT8P20-201ENST00000423953 1409 ntBASIC27.16■■□□□ 1.94
SBNO1A3KN83 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC27.16■■□□□ 1.94
SBNO1A3KN83 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
SBNO1A3KN83 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC27.16■■□□□ 1.94
SBNO1A3KN83 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
SBNO1A3KN83 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
SBNO1A3KN83 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
SBNO1A3KN83 UPK3BP1-201ENST00000428678 509 ntBASIC27.16■■□□□ 1.94
SBNO1A3KN83 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
SBNO1A3KN83 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC27.16■■□□□ 1.94
SBNO1A3KN83 AC091076.1-201ENST00000610741 619 ntBASIC27.16■■□□□ 1.94
SBNO1A3KN83 AL358472.4-201ENST00000633140 710 ntBASIC27.16■■□□□ 1.94
SBNO1A3KN83 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC27.16■■□□□ 1.94
SBNO1A3KN83 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC27.16■■□□□ 1.94
SBNO1A3KN83 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC27.16■■□□□ 1.94
SBNO1A3KN83 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
SBNO1A3KN83 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
SBNO1A3KN83 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC27.15■■□□□ 1.94
SBNO1A3KN83 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SBNO1A3KN83 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SBNO1A3KN83 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SBNO1A3KN83 AK4P3-201ENST00000418260 669 ntBASIC27.15■■□□□ 1.94
SBNO1A3KN83 BX664615.1-201ENST00000443558 458 ntBASIC27.15■■□□□ 1.94
SBNO1A3KN83 AC011506.1-201ENST00000474329 610 ntBASIC27.15■■□□□ 1.94
SBNO1A3KN83 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
SBNO1A3KN83 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC27.15■■□□□ 1.94
SBNO1A3KN83 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC27.15■■□□□ 1.94
SBNO1A3KN83 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC27.15■■□□□ 1.94
SBNO1A3KN83 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC27.15■■□□□ 1.94
SBNO1A3KN83 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SBNO1A3KN83 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC27.15■■□□□ 1.94
SBNO1A3KN83 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC27.14■■□□□ 1.94
SBNO1A3KN83 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
SBNO1A3KN83 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC27.14■■□□□ 1.94
SBNO1A3KN83 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC27.14■■□□□ 1.94
SBNO1A3KN83 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
SBNO1A3KN83 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
SBNO1A3KN83 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC27.14■■□□□ 1.94
SBNO1A3KN83 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
SBNO1A3KN83 AC004980.1-204ENST00000429707 299 ntBASIC27.14■■□□□ 1.94
SBNO1A3KN83 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
SBNO1A3KN83 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC27.14■■□□□ 1.94
SBNO1A3KN83 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC27.14■■□□□ 1.94
SBNO1A3KN83 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
SBNO1A3KN83 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
SBNO1A3KN83 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.93
SBNO1A3KN83 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC27.14■■□□□ 1.93
SBNO1A3KN83 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC27.14■■□□□ 1.93
SBNO1A3KN83 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
SBNO1A3KN83 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
SBNO1A3KN83 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC27.13■■□□□ 1.93
SBNO1A3KN83 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
SBNO1A3KN83 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
SBNO1A3KN83 INGX-201ENST00000359239 846 ntBASIC27.13■■□□□ 1.93
SBNO1A3KN83 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
SBNO1A3KN83 FAM8A6P-201ENST00000407496 1135 ntBASIC27.13■■□□□ 1.93
SBNO1A3KN83 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
SBNO1A3KN83 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC27.13■■□□□ 1.93
SBNO1A3KN83 AC128688.1-201ENST00000487626 519 ntBASIC27.13■■□□□ 1.93
SBNO1A3KN83 NMU-205ENST00000511469 756 ntTSL 3 BASIC27.13■■□□□ 1.93
SBNO1A3KN83 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC27.13■■□□□ 1.93
SBNO1A3KN83 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC27.13■■□□□ 1.93
SBNO1A3KN83 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
SBNO1A3KN83 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC27.13■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms