Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC189A1A4V9 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC189A1A4V9 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC189A1A4V9 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC189A1A4V9 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC189A1A4V9 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CCDC189A1A4V9 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.9■□□□□ 0.78
CCDC189A1A4V9 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC189A1A4V9 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.9■□□□□ 0.78
CCDC189A1A4V9 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.9■□□□□ 0.78
CCDC189A1A4V9 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.9■□□□□ 0.78
CCDC189A1A4V9 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC189A1A4V9 AC010536.3-201ENST00000620306 533 ntBASIC19.9■□□□□ 0.78
CCDC189A1A4V9 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.9■□□□□ 0.78
CCDC189A1A4V9 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC189A1A4V9 AC087633.2-202ENST00000565166 1439 ntBASIC19.9■□□□□ 0.78
CCDC189A1A4V9 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC189A1A4V9 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC189A1A4V9 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC189A1A4V9 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC189A1A4V9 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC189A1A4V9 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CCDC189A1A4V9 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CCDC189A1A4V9 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.89■□□□□ 0.78
CCDC189A1A4V9 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC189A1A4V9 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC189A1A4V9 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC189A1A4V9 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.89■□□□□ 0.77
CCDC189A1A4V9 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC189A1A4V9 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC189A1A4V9 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CCDC189A1A4V9 NTF6G-201ENST00000591094 616 ntBASIC19.89■□□□□ 0.77
CCDC189A1A4V9 MIR6821-201ENST00000617625 74 ntBASIC19.89■□□□□ 0.77
CCDC189A1A4V9 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CCDC189A1A4V9 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CCDC189A1A4V9 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC189A1A4V9 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC189A1A4V9 AL139384.1-201ENST00000612143 3047 ntBASIC19.89■□□□□ 0.77
CCDC189A1A4V9 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC189A1A4V9 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
CCDC189A1A4V9 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC189A1A4V9 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC189A1A4V9 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC189A1A4V9 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC189A1A4V9 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC189A1A4V9 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC189A1A4V9 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CCDC189A1A4V9 AC013268.1-206ENST00000638368 961 ntBASIC19.88■□□□□ 0.77
CCDC189A1A4V9 AC112229.1-201ENST00000639295 961 ntBASIC19.88■□□□□ 0.77
CCDC189A1A4V9 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC189A1A4V9 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.88■□□□□ 0.77
CCDC189A1A4V9 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC189A1A4V9 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CCDC189A1A4V9 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CCDC189A1A4V9 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC189A1A4V9 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.88■□□□□ 0.77
CCDC189A1A4V9 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC189A1A4V9 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC189A1A4V9 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CCDC189A1A4V9 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC189A1A4V9 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC189A1A4V9 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CCDC189A1A4V9 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC189A1A4V9 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC189A1A4V9 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC189A1A4V9 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
CCDC189A1A4V9 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC189A1A4V9 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC189A1A4V9 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.87■□□□□ 0.77
CCDC189A1A4V9 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.87■□□□□ 0.77
CCDC189A1A4V9 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.87■□□□□ 0.77
CCDC189A1A4V9 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.87■□□□□ 0.77
CCDC189A1A4V9 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CCDC189A1A4V9 AC100791.3-201ENST00000617619 330 ntBASIC19.87■□□□□ 0.77
CCDC189A1A4V9 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC189A1A4V9 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC189A1A4V9 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC189A1A4V9 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC189A1A4V9 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC189A1A4V9 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC189A1A4V9 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC189A1A4V9 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC189A1A4V9 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC189A1A4V9 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC189A1A4V9 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC189A1A4V9 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC189A1A4V9 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC189A1A4V9 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC189A1A4V9 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC189A1A4V9 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC189A1A4V9 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC189A1A4V9 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC189A1A4V9 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.86■□□□□ 0.77
CCDC189A1A4V9 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC189A1A4V9 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC189A1A4V9 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC189A1A4V9 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
CCDC189A1A4V9 AL133373.2-201ENST00000623187 2828 ntBASIC19.86■□□□□ 0.77
CCDC189A1A4V9 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC189A1A4V9 TCF3P1-201ENST00000423021 1937 ntBASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms