Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV30A0A087WSZ9 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV30A0A087WSZ9 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV30A0A087WSZ9 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.1
TRAV30A0A087WSZ9 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.1
TRAV30A0A087WSZ9 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV30A0A087WSZ9 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV30A0A087WSZ9 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC15.64■□□□□ 0.09
TRAV30A0A087WSZ9 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC15.64■□□□□ 0.09
TRAV30A0A087WSZ9 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV30A0A087WSZ9 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV30A0A087WSZ9 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV30A0A087WSZ9 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV30A0A087WSZ9 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV30A0A087WSZ9 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV30A0A087WSZ9 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV30A0A087WSZ9 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC15.64■□□□□ 0.09
TRAV30A0A087WSZ9 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV30A0A087WSZ9 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV30A0A087WSZ9 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV30A0A087WSZ9 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV30A0A087WSZ9 STX7-201ENST00000367937 1090 ntTSL 5 BASIC15.64■□□□□ 0.09
TRAV30A0A087WSZ9 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV30A0A087WSZ9 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
TRAV30A0A087WSZ9 AC016769.1-201ENST00000409132 1010 ntBASIC15.64■□□□□ 0.09
TRAV30A0A087WSZ9 GXYLT1P2-201ENST00000433312 1230 ntBASIC15.64■□□□□ 0.09
TRAV30A0A087WSZ9 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV30A0A087WSZ9 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV30A0A087WSZ9 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC15.64■□□□□ 0.09
TRAV30A0A087WSZ9 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TRAV30A0A087WSZ9 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC15.64■□□□□ 0.09
TRAV30A0A087WSZ9 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC15.64■□□□□ 0.09
TRAV30A0A087WSZ9 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV30A0A087WSZ9 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC15.64■□□□□ 0.09
TRAV30A0A087WSZ9 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC15.64■□□□□ 0.09
TRAV30A0A087WSZ9 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV30A0A087WSZ9 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV30A0A087WSZ9 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC15.64■□□□□ 0.09
TRAV30A0A087WSZ9 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV30A0A087WSZ9 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV30A0A087WSZ9 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV30A0A087WSZ9 PCDHAC2-203ENST00000615316 3011 ntBASIC15.63■□□□□ 0.09
TRAV30A0A087WSZ9 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV30A0A087WSZ9 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
TRAV30A0A087WSZ9 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
TRAV30A0A087WSZ9 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
TRAV30A0A087WSZ9 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV30A0A087WSZ9 HACD1-201ENST00000326961 773 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAV30A0A087WSZ9 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV30A0A087WSZ9 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
TRAV30A0A087WSZ9 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
TRAV30A0A087WSZ9 MCRIP2P1-201ENST00000394346 511 ntBASIC15.63■□□□□ 0.09
TRAV30A0A087WSZ9 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC15.63■□□□□ 0.09
TRAV30A0A087WSZ9 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV30A0A087WSZ9 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV30A0A087WSZ9 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
TRAV30A0A087WSZ9 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TRAV30A0A087WSZ9 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV30A0A087WSZ9 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAV30A0A087WSZ9 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV30A0A087WSZ9 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV30A0A087WSZ9 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV30A0A087WSZ9 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV30A0A087WSZ9 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV30A0A087WSZ9 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV30A0A087WSZ9 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV30A0A087WSZ9 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC15.63■□□□□ 0.09
TRAV30A0A087WSZ9 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV30A0A087WSZ9 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
TRAV30A0A087WSZ9 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV30A0A087WSZ9 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TRAV30A0A087WSZ9 H19-201ENST00000411754 1788 ntTSL 5 BASIC15.62■□□□□ 0.09
TRAV30A0A087WSZ9 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV30A0A087WSZ9 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV30A0A087WSZ9 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TRAV30A0A087WSZ9 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
TRAV30A0A087WSZ9 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC15.62■□□□□ 0.09
TRAV30A0A087WSZ9 HSCB-202ENST00000398941 955 ntTSL 2 BASIC15.62■□□□□ 0.09
TRAV30A0A087WSZ9 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
TRAV30A0A087WSZ9 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC15.62■□□□□ 0.09
TRAV30A0A087WSZ9 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC15.62■□□□□ 0.09
TRAV30A0A087WSZ9 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC15.62■□□□□ 0.09
TRAV30A0A087WSZ9 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TRAV30A0A087WSZ9 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV30A0A087WSZ9 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV30A0A087WSZ9 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC15.62■□□□□ 0.09
TRAV30A0A087WSZ9 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC15.62■□□□□ 0.09
TRAV30A0A087WSZ9 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV30A0A087WSZ9 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV30A0A087WSZ9 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV30A0A087WSZ9 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TRAV30A0A087WSZ9 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC15.62■□□□□ 0.09
TRAV30A0A087WSZ9 GAS2L1P2-201ENST00000436355 1356 ntBASIC15.62■□□□□ 0.09
TRAV30A0A087WSZ9 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TRAV30A0A087WSZ9 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC15.61■□□□□ 0.09
TRAV30A0A087WSZ9 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
TRAV30A0A087WSZ9 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV30A0A087WSZ9 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV30A0A087WSZ9 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV30A0A087WSZ9 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms