Protein–RNA interactions for Protein: S4R3C0

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S4R3C0 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
S4R3C0 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
S4R3C0 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
S4R3C0 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
S4R3C0 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
S4R3C0 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
S4R3C0 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.34■□□□□ 0.85
S4R3C0 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
S4R3C0 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
S4R3C0 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
S4R3C0 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
S4R3C0 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.33■□□□□ 0.85
S4R3C0 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
S4R3C0 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
S4R3C0 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
S4R3C0 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
S4R3C0 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.32■□□□□ 0.84
S4R3C0 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.32■□□□□ 0.84
S4R3C0 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
S4R3C0 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
S4R3C0 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
S4R3C0 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
S4R3C0 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
S4R3C0 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
S4R3C0 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC20.31■□□□□ 0.84
S4R3C0 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
S4R3C0 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
S4R3C0 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.3■□□□□ 0.84
S4R3C0 AC127502.1-201ENST00000399971 1502 ntBASIC20.3■□□□□ 0.84
S4R3C0 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.3■□□□□ 0.84
S4R3C0 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
S4R3C0 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
S4R3C0 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.29■□□□□ 0.84
S4R3C0 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.29■□□□□ 0.84
S4R3C0 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.29■□□□□ 0.84
S4R3C0 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.29■□□□□ 0.84
S4R3C0 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
S4R3C0 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
S4R3C0 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
S4R3C0 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
S4R3C0 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
S4R3C0 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
S4R3C0 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
S4R3C0 MIR3665-201ENST00000578708 105 ntBASIC20.26■□□□□ 0.83
S4R3C0 NRG1-221ENST00000614767 762 ntTSL 5 BASIC20.26■□□□□ 0.83
S4R3C0 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.26■□□□□ 0.83
S4R3C0 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
S4R3C0 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.25■□□□□ 0.83
S4R3C0 AL162393.1-201ENST00000437852 946 ntBASIC20.25■□□□□ 0.83
S4R3C0 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
S4R3C0 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
S4R3C0 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
S4R3C0 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.23■□□□□ 0.83
S4R3C0 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
S4R3C0 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
S4R3C0 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
S4R3C0 AP006261.1-201ENST00000584783 668 ntBASIC20.22■□□□□ 0.83
S4R3C0 MIR6090-201ENST00000622481 60 ntBASIC20.22■□□□□ 0.83
S4R3C0 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
S4R3C0 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
S4R3C0 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
S4R3C0 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
S4R3C0 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.19■□□□□ 0.82
S4R3C0 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
S4R3C0 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
S4R3C0 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
S4R3C0 AC087741.3-201ENST00000624270 1347 ntBASIC20.18■□□□□ 0.82
S4R3C0 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
S4R3C0 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
S4R3C0 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
S4R3C0 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
S4R3C0 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
S4R3C0 AC108673.1-201ENST00000510422 1159 ntBASIC20.17■□□□□ 0.82
S4R3C0 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.17■□□□□ 0.82
S4R3C0 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
S4R3C0 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
S4R3C0 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
S4R3C0 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
S4R3C0 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
S4R3C0 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20.15■□□□□ 0.82
S4R3C0 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.15■□□□□ 0.82
S4R3C0 DRD5P2-201ENST00000421395 2012 ntBASIC20.15■□□□□ 0.82
S4R3C0 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
S4R3C0 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
S4R3C0 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC20.14■□□□□ 0.81
S4R3C0 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
S4R3C0 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
S4R3C0 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
S4R3C0 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
S4R3C0 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
S4R3C0 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
S4R3C0 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
S4R3C0 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
S4R3C0 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
S4R3C0 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
S4R3C0 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.13■□□□□ 0.81
S4R3C0 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
S4R3C0 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
S4R3C0 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
S4R3C0 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms