Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SPCS1Q9Y6A9 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
SPCS1Q9Y6A9 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SPCS1Q9Y6A9 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SPCS1Q9Y6A9 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SPCS1Q9Y6A9 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
SPCS1Q9Y6A9 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
SPCS1Q9Y6A9 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SPCS1Q9Y6A9 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
SPCS1Q9Y6A9 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SPCS1Q9Y6A9 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SPCS1Q9Y6A9 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SPCS1Q9Y6A9 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SPCS1Q9Y6A9 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SPCS1Q9Y6A9 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
SPCS1Q9Y6A9 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
SPCS1Q9Y6A9 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
SPCS1Q9Y6A9 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SPCS1Q9Y6A9 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SPCS1Q9Y6A9 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC18■□□□□ 0.47
SPCS1Q9Y6A9 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
SPCS1Q9Y6A9 AC093323.1-202ENST00000635031 2045 ntBASIC17.99■□□□□ 0.47
SPCS1Q9Y6A9 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SPCS1Q9Y6A9 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC17.99■□□□□ 0.47
SPCS1Q9Y6A9 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SPCS1Q9Y6A9 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC17.98■□□□□ 0.47
SPCS1Q9Y6A9 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SPCS1Q9Y6A9 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SPCS1Q9Y6A9 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SPCS1Q9Y6A9 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SPCS1Q9Y6A9 AC120057.4-201ENST00000624722 1615 ntBASIC17.98■□□□□ 0.47
SPCS1Q9Y6A9 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SPCS1Q9Y6A9 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SPCS1Q9Y6A9 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SPCS1Q9Y6A9 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SPCS1Q9Y6A9 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SPCS1Q9Y6A9 ST7-AS1-201ENST00000456775 1889 ntBASIC17.97■□□□□ 0.47
SPCS1Q9Y6A9 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SPCS1Q9Y6A9 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
SPCS1Q9Y6A9 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SPCS1Q9Y6A9 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SPCS1Q9Y6A9 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
SPCS1Q9Y6A9 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SPCS1Q9Y6A9 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SPCS1Q9Y6A9 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SPCS1Q9Y6A9 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SPCS1Q9Y6A9 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC17.93■□□□□ 0.46
SPCS1Q9Y6A9 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC17.93■□□□□ 0.46
SPCS1Q9Y6A9 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SPCS1Q9Y6A9 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SPCS1Q9Y6A9 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SPCS1Q9Y6A9 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SPCS1Q9Y6A9 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SPCS1Q9Y6A9 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SPCS1Q9Y6A9 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SPCS1Q9Y6A9 RARA-203ENST00000394086 2008 ntTSL 2 BASIC17.9■□□□□ 0.46
SPCS1Q9Y6A9 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC17.9■□□□□ 0.46
SPCS1Q9Y6A9 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
SPCS1Q9Y6A9 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.46
SPCS1Q9Y6A9 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SPCS1Q9Y6A9 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC17.89■□□□□ 0.45
SPCS1Q9Y6A9 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SPCS1Q9Y6A9 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SPCS1Q9Y6A9 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SPCS1Q9Y6A9 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SPCS1Q9Y6A9 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC17.88■□□□□ 0.45
SPCS1Q9Y6A9 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SPCS1Q9Y6A9 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SPCS1Q9Y6A9 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SPCS1Q9Y6A9 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SPCS1Q9Y6A9 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SPCS1Q9Y6A9 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SPCS1Q9Y6A9 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SPCS1Q9Y6A9 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SPCS1Q9Y6A9 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SPCS1Q9Y6A9 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SPCS1Q9Y6A9 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SPCS1Q9Y6A9 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC17.87■□□□□ 0.45
SPCS1Q9Y6A9 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC17.87■□□□□ 0.45
SPCS1Q9Y6A9 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC17.85■□□□□ 0.45
SPCS1Q9Y6A9 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SPCS1Q9Y6A9 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
SPCS1Q9Y6A9 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC17.85■□□□□ 0.45
SPCS1Q9Y6A9 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SPCS1Q9Y6A9 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SPCS1Q9Y6A9 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SPCS1Q9Y6A9 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
SPCS1Q9Y6A9 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SPCS1Q9Y6A9 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SPCS1Q9Y6A9 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC17.82■□□□□ 0.44
SPCS1Q9Y6A9 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SPCS1Q9Y6A9 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SPCS1Q9Y6A9 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC17.82■□□□□ 0.44
SPCS1Q9Y6A9 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SPCS1Q9Y6A9 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SPCS1Q9Y6A9 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SPCS1Q9Y6A9 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC17.81■□□□□ 0.44
SPCS1Q9Y6A9 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SPCS1Q9Y6A9 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SPCS1Q9Y6A9 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 9 ms