Protein–RNA interactions for Protein: Q9D361

Snrnp48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp48Q9D361 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Snrnp48Q9D361 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Snrnp48Q9D361 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Snrnp48Q9D361 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Snrnp48Q9D361 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
Snrnp48Q9D361 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC23.88■■□□□ 1.41
Snrnp48Q9D361 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Snrnp48Q9D361 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Snrnp48Q9D361 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC23.87■■□□□ 1.41
Snrnp48Q9D361 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Snrnp48Q9D361 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Snrnp48Q9D361 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC23.87■■□□□ 1.41
Snrnp48Q9D361 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Snrnp48Q9D361 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Snrnp48Q9D361 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Snrnp48Q9D361 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Snrnp48Q9D361 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
Snrnp48Q9D361 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Snrnp48Q9D361 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Snrnp48Q9D361 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
Snrnp48Q9D361 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Snrnp48Q9D361 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Snrnp48Q9D361 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Snrnp48Q9D361 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Snrnp48Q9D361 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Snrnp48Q9D361 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Snrnp48Q9D361 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Snrnp48Q9D361 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Snrnp48Q9D361 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
Snrnp48Q9D361 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
Snrnp48Q9D361 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
Snrnp48Q9D361 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Snrnp48Q9D361 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Snrnp48Q9D361 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.8■■□□□ 1.4
Snrnp48Q9D361 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Snrnp48Q9D361 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Snrnp48Q9D361 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC23.79■■□□□ 1.4
Snrnp48Q9D361 Gm30023-201ENSMUST00000197970 889 ntBASIC23.78■■□□□ 1.4
Snrnp48Q9D361 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Snrnp48Q9D361 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC23.77■■□□□ 1.4
Snrnp48Q9D361 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Snrnp48Q9D361 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Snrnp48Q9D361 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Snrnp48Q9D361 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Snrnp48Q9D361 Nkain2-201ENSMUST00000092602 558 ntBASIC23.75■■□□□ 1.39
Snrnp48Q9D361 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
Snrnp48Q9D361 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
Snrnp48Q9D361 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Snrnp48Q9D361 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
Snrnp48Q9D361 Gm42809-201ENSMUST00000198429 1138 ntBASIC23.73■■□□□ 1.39
Snrnp48Q9D361 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.73■■□□□ 1.39
Snrnp48Q9D361 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Snrnp48Q9D361 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Snrnp48Q9D361 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Snrnp48Q9D361 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Snrnp48Q9D361 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Snrnp48Q9D361 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Snrnp48Q9D361 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Snrnp48Q9D361 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Snrnp48Q9D361 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC23.7■■□□□ 1.38
Snrnp48Q9D361 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Snrnp48Q9D361 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Snrnp48Q9D361 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Snrnp48Q9D361 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.68■■□□□ 1.38
Snrnp48Q9D361 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
Snrnp48Q9D361 Gm9939-201ENSMUST00000067161 1154 ntBASIC23.67■■□□□ 1.38
Snrnp48Q9D361 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Snrnp48Q9D361 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Snrnp48Q9D361 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.66■■□□□ 1.38
Snrnp48Q9D361 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Snrnp48Q9D361 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Snrnp48Q9D361 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC23.66■■□□□ 1.38
Snrnp48Q9D361 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Snrnp48Q9D361 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
Snrnp48Q9D361 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
Snrnp48Q9D361 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
Snrnp48Q9D361 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.63■■□□□ 1.37
Snrnp48Q9D361 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Snrnp48Q9D361 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
Snrnp48Q9D361 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.63■■□□□ 1.37
Snrnp48Q9D361 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Snrnp48Q9D361 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC23.62■■□□□ 1.37
Snrnp48Q9D361 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Snrnp48Q9D361 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Snrnp48Q9D361 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Snrnp48Q9D361 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Snrnp48Q9D361 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
Snrnp48Q9D361 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
Snrnp48Q9D361 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Snrnp48Q9D361 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Snrnp48Q9D361 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Snrnp48Q9D361 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Snrnp48Q9D361 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
Snrnp48Q9D361 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Snrnp48Q9D361 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
Snrnp48Q9D361 Gm6821-201ENSMUST00000107540 542 ntBASIC23.57■■□□□ 1.36
Snrnp48Q9D361 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC23.57■■□□□ 1.36
Snrnp48Q9D361 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Snrnp48Q9D361 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Snrnp48Q9D361 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms