Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chchd1Q9CQA6 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Chchd1Q9CQA6 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Chchd1Q9CQA6 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chchd1Q9CQA6 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC18.11■□□□□ 0.49
Chchd1Q9CQA6 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chchd1Q9CQA6 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Chchd1Q9CQA6 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chchd1Q9CQA6 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Chchd1Q9CQA6 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Chchd1Q9CQA6 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
Chchd1Q9CQA6 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Chchd1Q9CQA6 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chchd1Q9CQA6 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chchd1Q9CQA6 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chchd1Q9CQA6 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC18.07■□□□□ 0.48
Chchd1Q9CQA6 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Chchd1Q9CQA6 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chchd1Q9CQA6 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Chchd1Q9CQA6 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chchd1Q9CQA6 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Chchd1Q9CQA6 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Chchd1Q9CQA6 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chchd1Q9CQA6 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Chchd1Q9CQA6 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chchd1Q9CQA6 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Chchd1Q9CQA6 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chchd1Q9CQA6 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chchd1Q9CQA6 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chchd1Q9CQA6 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
Chchd1Q9CQA6 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chchd1Q9CQA6 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chchd1Q9CQA6 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chchd1Q9CQA6 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chchd1Q9CQA6 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Chchd1Q9CQA6 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chchd1Q9CQA6 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Chchd1Q9CQA6 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Chchd1Q9CQA6 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.02■□□□□ 0.47
Chchd1Q9CQA6 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chchd1Q9CQA6 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chchd1Q9CQA6 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chchd1Q9CQA6 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Chchd1Q9CQA6 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chchd1Q9CQA6 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Chchd1Q9CQA6 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18■□□□□ 0.47
Chchd1Q9CQA6 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chchd1Q9CQA6 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Chchd1Q9CQA6 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
Chchd1Q9CQA6 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Chchd1Q9CQA6 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Chchd1Q9CQA6 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Chchd1Q9CQA6 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17.99■□□□□ 0.47
Chchd1Q9CQA6 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Chchd1Q9CQA6 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Chchd1Q9CQA6 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chchd1Q9CQA6 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chchd1Q9CQA6 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chchd1Q9CQA6 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chchd1Q9CQA6 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17.98■□□□□ 0.47
Chchd1Q9CQA6 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Chchd1Q9CQA6 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC17.98■□□□□ 0.47
Chchd1Q9CQA6 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Chchd1Q9CQA6 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chchd1Q9CQA6 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Chchd1Q9CQA6 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chchd1Q9CQA6 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chchd1Q9CQA6 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Chchd1Q9CQA6 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Chchd1Q9CQA6 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chchd1Q9CQA6 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Chchd1Q9CQA6 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chchd1Q9CQA6 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chchd1Q9CQA6 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC17.93■□□□□ 0.46
Chchd1Q9CQA6 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Chchd1Q9CQA6 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chchd1Q9CQA6 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Chchd1Q9CQA6 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Chchd1Q9CQA6 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chchd1Q9CQA6 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Chchd1Q9CQA6 Gm30346-201ENSMUST00000218641 1699 ntBASIC17.91■□□□□ 0.46
Chchd1Q9CQA6 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chchd1Q9CQA6 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chchd1Q9CQA6 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chchd1Q9CQA6 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chchd1Q9CQA6 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chchd1Q9CQA6 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chchd1Q9CQA6 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC17.89■□□□□ 0.46
Chchd1Q9CQA6 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
Chchd1Q9CQA6 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Chchd1Q9CQA6 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chchd1Q9CQA6 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chchd1Q9CQA6 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chchd1Q9CQA6 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chchd1Q9CQA6 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC17.88■□□□□ 0.45
Chchd1Q9CQA6 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Chchd1Q9CQA6 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Chchd1Q9CQA6 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Chchd1Q9CQA6 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Chchd1Q9CQA6 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms