Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.7■■□□□ 1.38
Pcdhga9Q91XX9 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC23.69■■□□□ 1.38
Pcdhga9Q91XX9 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC23.69■■□□□ 1.38
Pcdhga9Q91XX9 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdhga9Q91XX9 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdhga9Q91XX9 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Pcdhga9Q91XX9 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdhga9Q91XX9 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhga9Q91XX9 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhga9Q91XX9 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhga9Q91XX9 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdhga9Q91XX9 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
Pcdhga9Q91XX9 Gm42809-201ENSMUST00000198429 1138 ntBASIC23.66■■□□□ 1.38
Pcdhga9Q91XX9 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdhga9Q91XX9 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdhga9Q91XX9 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdhga9Q91XX9 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.38
Pcdhga9Q91XX9 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Pcdhga9Q91XX9 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC23.64■■□□□ 1.37
Pcdhga9Q91XX9 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Pcdhga9Q91XX9 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Pcdhga9Q91XX9 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdhga9Q91XX9 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.62■■□□□ 1.37
Pcdhga9Q91XX9 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
Pcdhga9Q91XX9 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC23.61■■□□□ 1.37
Pcdhga9Q91XX9 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdhga9Q91XX9 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdhga9Q91XX9 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdhga9Q91XX9 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
Pcdhga9Q91XX9 Nkain2-201ENSMUST00000092602 558 ntBASIC23.58■■□□□ 1.37
Pcdhga9Q91XX9 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Pcdhga9Q91XX9 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Pcdhga9Q91XX9 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC23.57■■□□□ 1.36
Pcdhga9Q91XX9 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdhga9Q91XX9 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdhga9Q91XX9 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdhga9Q91XX9 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC23.56■■□□□ 1.36
Pcdhga9Q91XX9 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC23.56■■□□□ 1.36
Pcdhga9Q91XX9 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdhga9Q91XX9 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhga9Q91XX9 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhga9Q91XX9 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdhga9Q91XX9 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdhga9Q91XX9 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdhga9Q91XX9 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
Pcdhga9Q91XX9 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdhga9Q91XX9 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
Pcdhga9Q91XX9 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdhga9Q91XX9 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdhga9Q91XX9 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdhga9Q91XX9 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.35
Pcdhga9Q91XX9 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdhga9Q91XX9 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdhga9Q91XX9 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Pcdhga9Q91XX9 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC23.5■■□□□ 1.35
Pcdhga9Q91XX9 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Pcdhga9Q91XX9 Gm30023-201ENSMUST00000197970 889 ntBASIC23.5■■□□□ 1.35
Pcdhga9Q91XX9 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC23.5■■□□□ 1.35
Pcdhga9Q91XX9 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdhga9Q91XX9 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC23.49■■□□□ 1.35
Pcdhga9Q91XX9 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdhga9Q91XX9 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdhga9Q91XX9 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Pcdhga9Q91XX9 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Pcdhga9Q91XX9 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Pcdhga9Q91XX9 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Pcdhga9Q91XX9 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.46■■□□□ 1.35
Pcdhga9Q91XX9 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Pcdhga9Q91XX9 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC23.45■■□□□ 1.34
Pcdhga9Q91XX9 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Pcdhga9Q91XX9 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Pcdhga9Q91XX9 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC23.43■■□□□ 1.34
Pcdhga9Q91XX9 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Pcdhga9Q91XX9 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Pcdhga9Q91XX9 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC23.42■■□□□ 1.34
Pcdhga9Q91XX9 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
Pcdhga9Q91XX9 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
Pcdhga9Q91XX9 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Pcdhga9Q91XX9 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.41■■□□□ 1.34
Pcdhga9Q91XX9 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Pcdhga9Q91XX9 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
Pcdhga9Q91XX9 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Pcdhga9Q91XX9 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Pcdhga9Q91XX9 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Pcdhga9Q91XX9 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23.39■■□□□ 1.34
Pcdhga9Q91XX9 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.39■■□□□ 1.33
Pcdhga9Q91XX9 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
Pcdhga9Q91XX9 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.39■■□□□ 1.33
Pcdhga9Q91XX9 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Pcdhga9Q91XX9 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Pcdhga9Q91XX9 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Pcdhga9Q91XX9 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Pcdhga9Q91XX9 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
Pcdhga9Q91XX9 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Pcdhga9Q91XX9 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Pcdhga9Q91XX9 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Pcdhga9Q91XX9 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Pcdhga9Q91XX9 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Pcdhga9Q91XX9 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Pcdhga9Q91XX9 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms