Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lsm11Q8BUV6 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Lsm11Q8BUV6 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.28■□□□□ 0.84
Lsm11Q8BUV6 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Lsm11Q8BUV6 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Lsm11Q8BUV6 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lsm11Q8BUV6 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lsm11Q8BUV6 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.26■□□□□ 0.83
Lsm11Q8BUV6 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lsm11Q8BUV6 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lsm11Q8BUV6 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lsm11Q8BUV6 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Lsm11Q8BUV6 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lsm11Q8BUV6 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lsm11Q8BUV6 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Lsm11Q8BUV6 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lsm11Q8BUV6 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Lsm11Q8BUV6 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lsm11Q8BUV6 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lsm11Q8BUV6 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lsm11Q8BUV6 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Lsm11Q8BUV6 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lsm11Q8BUV6 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lsm11Q8BUV6 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lsm11Q8BUV6 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lsm11Q8BUV6 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Lsm11Q8BUV6 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Lsm11Q8BUV6 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lsm11Q8BUV6 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Lsm11Q8BUV6 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Lsm11Q8BUV6 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lsm11Q8BUV6 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Lsm11Q8BUV6 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lsm11Q8BUV6 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Lsm11Q8BUV6 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lsm11Q8BUV6 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lsm11Q8BUV6 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Lsm11Q8BUV6 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lsm11Q8BUV6 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lsm11Q8BUV6 Gm24804-201ENSMUST00000174982 85 ntBASIC20.14■□□□□ 0.81
Lsm11Q8BUV6 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.14■□□□□ 0.81
Lsm11Q8BUV6 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Lsm11Q8BUV6 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Lsm11Q8BUV6 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lsm11Q8BUV6 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Lsm11Q8BUV6 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Lsm11Q8BUV6 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lsm11Q8BUV6 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lsm11Q8BUV6 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lsm11Q8BUV6 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lsm11Q8BUV6 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lsm11Q8BUV6 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lsm11Q8BUV6 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lsm11Q8BUV6 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Lsm11Q8BUV6 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lsm11Q8BUV6 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lsm11Q8BUV6 Gm16148-201ENSMUST00000119653 893 ntBASIC20.1■□□□□ 0.81
Lsm11Q8BUV6 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Lsm11Q8BUV6 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lsm11Q8BUV6 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Lsm11Q8BUV6 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lsm11Q8BUV6 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Lsm11Q8BUV6 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Lsm11Q8BUV6 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Lsm11Q8BUV6 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.08■□□□□ 0.81
Lsm11Q8BUV6 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Lsm11Q8BUV6 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Lsm11Q8BUV6 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Lsm11Q8BUV6 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lsm11Q8BUV6 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lsm11Q8BUV6 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
Lsm11Q8BUV6 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lsm11Q8BUV6 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lsm11Q8BUV6 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lsm11Q8BUV6 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lsm11Q8BUV6 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Lsm11Q8BUV6 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Lsm11Q8BUV6 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lsm11Q8BUV6 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.04■□□□□ 0.8
Lsm11Q8BUV6 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lsm11Q8BUV6 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lsm11Q8BUV6 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lsm11Q8BUV6 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Lsm11Q8BUV6 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Lsm11Q8BUV6 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lsm11Q8BUV6 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Lsm11Q8BUV6 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lsm11Q8BUV6 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Lsm11Q8BUV6 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lsm11Q8BUV6 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Lsm11Q8BUV6 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lsm11Q8BUV6 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lsm11Q8BUV6 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Lsm11Q8BUV6 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Lsm11Q8BUV6 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.01■□□□□ 0.79
Lsm11Q8BUV6 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.01■□□□□ 0.79
Lsm11Q8BUV6 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lsm11Q8BUV6 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lsm11Q8BUV6 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20■□□□□ 0.79
Lsm11Q8BUV6 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms