Protein–RNA interactions for Protein: Q12377

RPN6, 26S proteasome regulatory subunit RPN6, yeastyeast

Predictions only

Length 434 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN6Q12377 tD(GUC)G1tD(GUC)G1 72 nt8.04□□□□□ -1.12
RPN6Q12377 tD(GUC)G2tD(GUC)G2 72 nt8.04□□□□□ -1.12
RPN6Q12377 tD(GUC)I1tD(GUC)I1 72 nt8.04□□□□□ -1.12
RPN6Q12377 tD(GUC)I2tD(GUC)I2 72 nt8.04□□□□□ -1.12
RPN6Q12377 tD(GUC)J1tD(GUC)J1 72 nt8.04□□□□□ -1.12
RPN6Q12377 tD(GUC)J2tD(GUC)J2 72 nt8.04□□□□□ -1.12
RPN6Q12377 tD(GUC)J3tD(GUC)J3 72 nt8.04□□□□□ -1.12
RPN6Q12377 tD(GUC)J4tD(GUC)J4 72 nt8.04□□□□□ -1.12
RPN6Q12377 tD(GUC)KtD(GUC)K 72 nt8.04□□□□□ -1.12
RPN6Q12377 tD(GUC)L1tD(GUC)L1 72 nt8.04□□□□□ -1.12
RPN6Q12377 tD(GUC)L2tD(GUC)L2 72 nt8.04□□□□□ -1.12
RPN6Q12377 tD(GUC)MtD(GUC)M 72 nt8.04□□□□□ -1.12
RPN6Q12377 tD(GUC)OtD(GUC)O 72 nt8.04□□□□□ -1.12
RPN6Q12377 APS2YJR058C 444 nt8.04□□□□□ -1.12
RPN6Q12377 SRP54YPR088C 1626 nt8.03□□□□□ -1.12
RPN6Q12377 YRF1-3YGR296W 5580 nt8.02□□□□□ -1.13
RPN6Q12377 YRF1-6YNL339C 5580 nt8.02□□□□□ -1.13
RPN6Q12377 YRF1-7YPL283C 5580 nt8.02□□□□□ -1.13
RPN6Q12377 REX2YLR059C 810 nt8□□□□□ -1.13
RPN6Q12377 YMC2YBR104W 990 nt8□□□□□ -1.13
RPN6Q12377 SPE2YOL052C 1191 nt7.99□□□□□ -1.13
RPN6Q12377 AAT1YKL106W 1356 nt7.98□□□□□ -1.13
RPN6Q12377 THP3YPR045C 1413 nt7.98□□□□□ -1.13
RPN6Q12377 FSH2YMR222C 672 nt7.98□□□□□ -1.13
RPN6Q12377 KRE1YNL322C 942 nt7.98□□□□□ -1.13
RPN6Q12377 HBS1YKR084C 1836 nt7.98□□□□□ -1.13
RPN6Q12377 GAS1YMR307W 1680 nt7.98□□□□□ -1.13
RPN6Q12377 TRP2YER090W 1524 nt7.98□□□□□ -1.13
RPN6Q12377 YIL177CYIL177C 5277 nt7.97□□□□□ -1.13
RPN6Q12377 NAS2YIL007C 663 nt7.97□□□□□ -1.13
RPN6Q12377 THI6YPL214C 1623 nt7.96□□□□□ -1.13
RPN6Q12377 PTC6YCR079W 1329 nt7.96□□□□□ -1.14
RPN6Q12377 HXT11YOL156W 1704 nt7.95□□□□□ -1.14
RPN6Q12377 MRS4YKR052C 915 nt7.95□□□□□ -1.14
RPN6Q12377 YPT11YNL304W 1254 nt7.95□□□□□ -1.14
RPN6Q12377 AAC3YBR085W 924 nt7.95□□□□□ -1.14
RPN6Q12377 ADH7YCR105W 1086 nt7.94□□□□□ -1.14
RPN6Q12377 CDD1YLR245C 429 nt7.94□□□□□ -1.14
RPN6Q12377 FIT1YDR534C 1587 nt7.93□□□□□ -1.14
RPN6Q12377 RAD51YER095W 1203 nt7.93□□□□□ -1.14
RPN6Q12377 UFD1YGR048W 1086 nt7.93□□□□□ -1.14
RPN6Q12377 EMC3YKL207W 762 nt7.93□□□□□ -1.14
RPN6Q12377 ESS1YJR017C 513 nt7.92□□□□□ -1.14
RPN6Q12377 DUR3YHL016C 2208 nt7.92□□□□□ -1.14
RPN6Q12377 TPN1YGL186C 1740 nt7.92□□□□□ -1.14
RPN6Q12377 YKR012CYKR012C 378 nt7.91□□□□□ -1.14
RPN6Q12377 YLR072WYLR072W 2082 nt7.91□□□□□ -1.14
RPN6Q12377 TMS1YDR105C 1422 nt7.9□□□□□ -1.14
RPN6Q12377 PAU5YFL020C 369 nt7.9□□□□□ -1.14
RPN6Q12377 PAU15YIR041W 375 nt7.9□□□□□ -1.14
RPN6Q12377 SDS24YBR214W 1584 nt7.88□□□□□ -1.15
RPN6Q12377 TOM71YHR117W 1920 nt7.88□□□□□ -1.15
RPN6Q12377 PAR32YDL173W 888 nt7.88□□□□□ -1.15
RPN6Q12377 STP3YLR375W 1032 nt7.88□□□□□ -1.15
RPN6Q12377 PGC1YPL206C 966 nt7.88□□□□□ -1.15
RPN6Q12377 SRM1YGL097W 1449 nt7.87□□□□□ -1.15
RPN6Q12377 VBA3YCL069W 1377 nt7.87□□□□□ -1.15
RPN6Q12377 snR86snR86 1004 nt7.87□□□□□ -1.15
RPN6Q12377 IGD1YFR017C 588 nt7.87□□□□□ -1.15
RPN6Q12377 ORT1YOR130C 879 nt7.87□□□□□ -1.15
RPN6Q12377 LYS20YDL182W 1287 nt7.86□□□□□ -1.15
RPN6Q12377 YMR210WYMR210W 1350 nt7.85□□□□□ -1.15
RPN6Q12377 PHB2YGR231C 933 nt7.85□□□□□ -1.15
RPN6Q12377 ADH3YMR083W 1128 nt7.85□□□□□ -1.15
RPN6Q12377 MCM5YLR274W 2328 nt7.85□□□□□ -1.15
RPN6Q12377 DUS3YLR401C 2007 nt7.85□□□□□ -1.15
RPN6Q12377 RSM7YJR113C 744 nt7.84□□□□□ -1.15
RPN6Q12377 NSG2YNL156C 900 nt7.84□□□□□ -1.15
RPN6Q12377 LPD1YFL018C 1500 nt7.83□□□□□ -1.16
RPN6Q12377 YJL009WYJL009W 327 nt7.82□□□□□ -1.16
RPN6Q12377 POP2YNR052C 1302 nt7.81□□□□□ -1.16
RPN6Q12377 YIR035CYIR035C 765 nt7.81□□□□□ -1.16
RPN6Q12377 YBR232CYBR232C 360 nt7.81□□□□□ -1.16
RPN6Q12377 snR4snR4 186 nt7.81□□□□□ -1.16
RPN6Q12377 YBR056WYBR056W 1506 nt7.81□□□□□ -1.16
RPN6Q12377 ENO1YGR254W 1314 nt7.8□□□□□ -1.16
RPN6Q12377 YFR020WYFR020W 699 nt7.8□□□□□ -1.16
RPN6Q12377 tS(GCU)LtS(GCU)L 80 nt7.8□□□□□ -1.16
RPN6Q12377 LEA1YPL213W 717 nt7.8□□□□□ -1.16
RPN6Q12377 YLR173WYLR173W 1827 nt7.8□□□□□ -1.16
RPN6Q12377 MOB1YIL106W 945 nt7.79□□□□□ -1.16
RPN6Q12377 ADE16YLR028C 1776 nt7.79□□□□□ -1.16
RPN6Q12377 FLX1YIL134W 936 nt7.78□□□□□ -1.16
RPN6Q12377 YJR149WYJR149W 1215 nt7.78□□□□□ -1.16
RPN6Q12377 BUB2YMR055C 921 nt7.78□□□□□ -1.16
RPN6Q12377 FTH1YBR207W 1398 nt7.78□□□□□ -1.16
RPN6Q12377 ALR1YOL130W 2580 nt7.77□□□□□ -1.16
RPN6Q12377 ABP1YCR088W 1779 nt7.77□□□□□ -1.17
RPN6Q12377 HIS3YOR202W 663 nt7.77□□□□□ -1.17
RPN6Q12377 tA(AGC)DtA(AGC)D 73 nt7.76□□□□□ -1.17
RPN6Q12377 tA(AGC)FtA(AGC)F 73 nt7.76□□□□□ -1.17
RPN6Q12377 tA(AGC)GtA(AGC)G 73 nt7.76□□□□□ -1.17
RPN6Q12377 tA(AGC)HtA(AGC)H 73 nt7.76□□□□□ -1.17
RPN6Q12377 tA(AGC)JtA(AGC)J 73 nt7.76□□□□□ -1.17
RPN6Q12377 tA(AGC)K1tA(AGC)K1 73 nt7.76□□□□□ -1.17
RPN6Q12377 tA(AGC)K2tA(AGC)K2 73 nt7.76□□□□□ -1.17
RPN6Q12377 tA(AGC)LtA(AGC)L 73 nt7.76□□□□□ -1.17
RPN6Q12377 tA(AGC)M1tA(AGC)M1 73 nt7.76□□□□□ -1.17
RPN6Q12377 tA(AGC)M2tA(AGC)M2 73 nt7.76□□□□□ -1.17
RPN6Q12377 tA(AGC)PtA(AGC)P 73 nt7.76□□□□□ -1.17
Retrieved 100 of 7,029 protein–RNA pairs in 29 ms