Protein–RNA interactions for Protein: P41245

Mmp9, Matrix metalloproteinase-9, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9P41245 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Mmp9P41245 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.83■□□□□ 0.76
Mmp9P41245 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Mmp9P41245 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Mmp9P41245 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.82■□□□□ 0.76
Mmp9P41245 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Mmp9P41245 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Mmp9P41245 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC19.81■□□□□ 0.76
Mmp9P41245 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Mmp9P41245 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Mmp9P41245 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Mmp9P41245 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Mmp9P41245 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mmp9P41245 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mmp9P41245 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Mmp9P41245 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mmp9P41245 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mmp9P41245 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Mmp9P41245 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.76■□□□□ 0.75
Mmp9P41245 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.76■□□□□ 0.75
Mmp9P41245 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
Mmp9P41245 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mmp9P41245 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Mmp9P41245 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.75■□□□□ 0.75
Mmp9P41245 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Mmp9P41245 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Mmp9P41245 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Mmp9P41245 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mmp9P41245 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mmp9P41245 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mmp9P41245 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Mmp9P41245 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mmp9P41245 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Mmp9P41245 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mmp9P41245 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mmp9P41245 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC19.73■□□□□ 0.75
Mmp9P41245 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mmp9P41245 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mmp9P41245 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Mmp9P41245 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mmp9P41245 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mmp9P41245 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Mmp9P41245 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Mmp9P41245 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.71■□□□□ 0.75
Mmp9P41245 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.71■□□□□ 0.75
Mmp9P41245 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.7■□□□□ 0.74
Mmp9P41245 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.7■□□□□ 0.74
Mmp9P41245 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Mmp9P41245 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Mmp9P41245 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mmp9P41245 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Mmp9P41245 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Mmp9P41245 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Mmp9P41245 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Mmp9P41245 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mmp9P41245 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mmp9P41245 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Mmp9P41245 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Mmp9P41245 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mmp9P41245 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Mmp9P41245 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.65■□□□□ 0.74
Mmp9P41245 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Mmp9P41245 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Mmp9P41245 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Mmp9P41245 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Mmp9P41245 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
Mmp9P41245 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Mmp9P41245 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Mmp9P41245 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mmp9P41245 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mmp9P41245 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mmp9P41245 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mmp9P41245 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mmp9P41245 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19.62■□□□□ 0.73
Mmp9P41245 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mmp9P41245 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mmp9P41245 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mmp9P41245 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
Mmp9P41245 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Mmp9P41245 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mmp9P41245 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mmp9P41245 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mmp9P41245 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mmp9P41245 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mmp9P41245 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mmp9P41245 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Mmp9P41245 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Mmp9P41245 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.59■□□□□ 0.73
Mmp9P41245 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mmp9P41245 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.59■□□□□ 0.73
Mmp9P41245 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Mmp9P41245 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Mmp9P41245 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Mmp9P41245 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Mmp9P41245 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Mmp9P41245 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Mmp9P41245 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Mmp9P41245 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Mmp9P41245 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
Mmp9P41245 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 9.8 ms