Protein–RNA interactions for Protein: P40505

SDS3, Transcriptional regulatory protein SDS3, yeastyeast

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SDS3P40505 YHR218WYHR218W 1812 nt9.02□□□□□ -0.97
SDS3P40505 THP3YPR045C 1413 nt9.02□□□□□ -0.97
SDS3P40505 IGD1YFR017C 588 nt9.01□□□□□ -0.97
SDS3P40505 YHL008CYHL008C 1884 nt9.01□□□□□ -0.97
SDS3P40505 REX2YLR059C 810 nt9.01□□□□□ -0.97
SDS3P40505 SAN1YDR143C 1833 nt9.01□□□□□ -0.97
SDS3P40505 INH1YDL181W 258 nt9□□□□□ -0.97
SDS3P40505 SBP1YHL034C 885 nt8.99□□□□□ -0.97
SDS3P40505 ERG6YML008C 1152 nt8.99□□□□□ -0.97
SDS3P40505 ALD5YER073W 1563 nt8.99□□□□□ -0.97
SDS3P40505 MTO1YGL236C 2010 nt8.98□□□□□ -0.97
SDS3P40505 AGP3YFL055W 1677 nt8.98□□□□□ -0.97
SDS3P40505 TPN1YGL186C 1740 nt8.97□□□□□ -0.97
SDS3P40505 YIA6YIL006W 1122 nt8.97□□□□□ -0.97
SDS3P40505 MOB1YIL106W 945 nt8.97□□□□□ -0.97
SDS3P40505 GPM1YKL152C 744 nt8.97□□□□□ -0.97
SDS3P40505 ADH3YMR083W 1128 nt8.97□□□□□ -0.97
SDS3P40505 TOM71YHR117W 1920 nt8.96□□□□□ -0.97
SDS3P40505 CDD1YLR245C 429 nt8.96□□□□□ -0.98
SDS3P40505 FSH2YMR222C 672 nt8.96□□□□□ -0.98
SDS3P40505 PTC6YCR079W 1329 nt8.94□□□□□ -0.98
SDS3P40505 GAS1YMR307W 1680 nt8.94□□□□□ -0.98
SDS3P40505 PHB2YGR231C 933 nt8.93□□□□□ -0.98
SDS3P40505 SOD2YHR008C 702 nt8.93□□□□□ -0.98
SDS3P40505 NSG2YNL156C 900 nt8.93□□□□□ -0.98
SDS3P40505 NPP2YEL016C 1482 nt8.93□□□□□ -0.98
SDS3P40505 GGA2YHR108W 1758 nt8.93□□□□□ -0.98
SDS3P40505 THI3YDL080C 1830 nt8.92□□□□□ -0.98
SDS3P40505 tE(CUC)DtE(CUC)D 72 nt8.92□□□□□ -0.98
SDS3P40505 tE(CUC)ItE(CUC)I 72 nt8.92□□□□□ -0.98
SDS3P40505 YMC2YBR104W 990 nt8.92□□□□□ -0.98
SDS3P40505 SDS24YBR214W 1584 nt8.91□□□□□ -0.98
SDS3P40505 tA(AGC)DtA(AGC)D 73 nt8.91□□□□□ -0.98
SDS3P40505 tA(AGC)FtA(AGC)F 73 nt8.91□□□□□ -0.98
SDS3P40505 tA(AGC)GtA(AGC)G 73 nt8.91□□□□□ -0.98
SDS3P40505 tA(AGC)HtA(AGC)H 73 nt8.91□□□□□ -0.98
SDS3P40505 tA(AGC)JtA(AGC)J 73 nt8.91□□□□□ -0.98
SDS3P40505 tA(AGC)K1tA(AGC)K1 73 nt8.91□□□□□ -0.98
SDS3P40505 tA(AGC)K2tA(AGC)K2 73 nt8.91□□□□□ -0.98
SDS3P40505 tA(AGC)LtA(AGC)L 73 nt8.91□□□□□ -0.98
SDS3P40505 tA(AGC)M1tA(AGC)M1 73 nt8.91□□□□□ -0.98
SDS3P40505 tA(AGC)M2tA(AGC)M2 73 nt8.91□□□□□ -0.98
SDS3P40505 tA(AGC)PtA(AGC)P 73 nt8.91□□□□□ -0.98
SDS3P40505 YBL095WYBL095W 813 nt8.91□□□□□ -0.98
SDS3P40505 YPT11YNL304W 1254 nt8.88□□□□□ -0.99
SDS3P40505 IPL1YPL209C 1104 nt8.88□□□□□ -0.99
SDS3P40505 ENO1YGR254W 1314 nt8.87□□□□□ -0.99
SDS3P40505 POP2YNR052C 1302 nt8.87□□□□□ -0.99
SDS3P40505 FLX1YIL134W 936 nt8.87□□□□□ -0.99
SDS3P40505 VBA3YCL069W 1377 nt8.86□□□□□ -0.99
SDS3P40505 YCR025CYCR025C 411 nt8.86□□□□□ -0.99
SDS3P40505 YMR316C-BYMR316C-B 309 nt8.86□□□□□ -0.99
SDS3P40505 AAT1YKL106W 1356 nt8.85□□□□□ -0.99
SDS3P40505 RSM7YJR113C 744 nt8.83□□□□□ -1
SDS3P40505 MRS4YKR052C 915 nt8.83□□□□□ -1
SDS3P40505 MCM5YLR274W 2328 nt8.82□□□□□ -1
SDS3P40505 YER152W-AYER152W-A 567 nt8.81□□□□□ -1
SDS3P40505 CYC3YAL039C 810 nt8.81□□□□□ -1
SDS3P40505 YLR173WYLR173W 1827 nt8.81□□□□□ -1
SDS3P40505 LYS20YDL182W 1287 nt8.8□□□□□ -1
SDS3P40505 YLR280CYLR280C 351 nt8.8□□□□□ -1
SDS3P40505 THI6YPL214C 1623 nt8.79□□□□□ -1
SDS3P40505 NBA1YOL070C 1506 nt8.79□□□□□ -1
SDS3P40505 TRP2YER090W 1524 nt8.77□□□□□ -1.01
SDS3P40505 YJL009WYJL009W 327 nt8.77□□□□□ -1.01
SDS3P40505 YCP4YCR004C 744 nt8.76□□□□□ -1.01
SDS3P40505 YFR020WYFR020W 699 nt8.76□□□□□ -1.01
SDS3P40505 EMC3YKL207W 762 nt8.76□□□□□ -1.01
SDS3P40505 RTG2YGL252C 1767 nt8.76□□□□□ -1.01
SDS3P40505 YJR149WYJR149W 1215 nt8.75□□□□□ -1.01
SDS3P40505 AAC3YBR085W 924 nt8.75□□□□□ -1.01
SDS3P40505 ERO1YML130C 1692 nt8.74□□□□□ -1.01
SDS3P40505 FET5YFL041W 1869 nt8.73□□□□□ -1.01
SDS3P40505 TGA1tA(UGC)A 73 nt8.73□□□□□ -1.01
SDS3P40505 tA(UGC)EtA(UGC)E 73 nt8.73□□□□□ -1.01
SDS3P40505 tA(UGC)GtA(UGC)G 73 nt8.73□□□□□ -1.01
SDS3P40505 tA(UGC)LtA(UGC)L 73 nt8.73□□□□□ -1.01
SDS3P40505 tA(UGC)OtA(UGC)O 73 nt8.73□□□□□ -1.01
SDS3P40505 SRP102YKL154W 735 nt8.73□□□□□ -1.01
SDS3P40505 TMS1YDR105C 1422 nt8.71□□□□□ -1.01
SDS3P40505 snR86snR86 1004 nt8.71□□□□□ -1.02
SDS3P40505 SER2YGR208W 930 nt8.71□□□□□ -1.02
SDS3P40505 YLR460CYLR460C 1131 nt8.71□□□□□ -1.02
SDS3P40505 ALR1YOL130W 2580 nt8.71□□□□□ -1.02
SDS3P40505 BUD20YLR074C 501 nt8.7□□□□□ -1.02
SDS3P40505 FCY1YPR062W 477 nt8.69□□□□□ -1.02
SDS3P40505 MDL2YPL270W 2322 nt8.69□□□□□ -1.02
SDS3P40505 MEP1YGR121C 1479 nt8.68□□□□□ -1.02
SDS3P40505 GCD11YER025W 1584 nt8.68□□□□□ -1.02
SDS3P40505 YGR210CYGR210C 1236 nt8.67□□□□□ -1.02
SDS3P40505 HTS1YPR033C 1641 nt8.67□□□□□ -1.02
SDS3P40505 tD(GUC)BtD(GUC)B 72 nt8.66□□□□□ -1.02
SDS3P40505 tD(GUC)DtD(GUC)D 72 nt8.66□□□□□ -1.02
SDS3P40505 tD(GUC)G1tD(GUC)G1 72 nt8.66□□□□□ -1.02
SDS3P40505 tD(GUC)G2tD(GUC)G2 72 nt8.66□□□□□ -1.02
SDS3P40505 tD(GUC)I1tD(GUC)I1 72 nt8.66□□□□□ -1.02
SDS3P40505 tD(GUC)I2tD(GUC)I2 72 nt8.66□□□□□ -1.02
SDS3P40505 tD(GUC)J1tD(GUC)J1 72 nt8.66□□□□□ -1.02
SDS3P40505 tD(GUC)J2tD(GUC)J2 72 nt8.66□□□□□ -1.02
SDS3P40505 tD(GUC)J3tD(GUC)J3 72 nt8.66□□□□□ -1.02
Retrieved 100 of 7,029 protein–RNA pairs in 141 ms