Protein–RNA interactions for Protein: P40343

VPS27, Vacuolar protein sorting-associated protein 27, yeastyeast

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS27P40343 tA(AGC)DtA(AGC)D 73 nt10.48□□□□□ -0.73
VPS27P40343 tA(AGC)FtA(AGC)F 73 nt10.48□□□□□ -0.73
VPS27P40343 tA(AGC)GtA(AGC)G 73 nt10.48□□□□□ -0.73
VPS27P40343 tA(AGC)HtA(AGC)H 73 nt10.48□□□□□ -0.73
VPS27P40343 tA(AGC)JtA(AGC)J 73 nt10.48□□□□□ -0.73
VPS27P40343 tA(AGC)K1tA(AGC)K1 73 nt10.48□□□□□ -0.73
VPS27P40343 tA(AGC)K2tA(AGC)K2 73 nt10.48□□□□□ -0.73
VPS27P40343 tA(AGC)LtA(AGC)L 73 nt10.48□□□□□ -0.73
VPS27P40343 tA(AGC)M1tA(AGC)M1 73 nt10.48□□□□□ -0.73
VPS27P40343 tA(AGC)M2tA(AGC)M2 73 nt10.48□□□□□ -0.73
VPS27P40343 tA(AGC)PtA(AGC)P 73 nt10.48□□□□□ -0.73
VPS27P40343 YDR510C-AYDR510C-A 117 nt10.48□□□□□ -0.73
VPS27P40343 YPT11YNL304W 1254 nt10.48□□□□□ -0.73
VPS27P40343 VBA3YCL069W 1377 nt10.48□□□□□ -0.73
VPS27P40343 AAT1YKL106W 1356 nt10.48□□□□□ -0.73
VPS27P40343 MTO1YGL236C 2010 nt10.47□□□□□ -0.73
VPS27P40343 NBA1YOL070C 1506 nt10.47□□□□□ -0.73
VPS27P40343 SEN2YLR105C 1134 nt10.46□□□□□ -0.73
VPS27P40343 TPO4YOR273C 1980 nt10.45□□□□□ -0.74
VPS27P40343 IPL1YPL209C 1104 nt10.45□□□□□ -0.74
VPS27P40343 MRS4YKR052C 915 nt10.44□□□□□ -0.74
VPS27P40343 FET5YFL041W 1869 nt10.43□□□□□ -0.74
VPS27P40343 ENO1YGR254W 1314 nt10.43□□□□□ -0.74
VPS27P40343 FLX1YIL134W 936 nt10.43□□□□□ -0.74
VPS27P40343 TRP2YER090W 1524 nt10.43□□□□□ -0.74
VPS27P40343 MET2YNL277W 1461 nt10.42□□□□□ -0.74
VPS27P40343 YJL064WYJL064W 396 nt10.41□□□□□ -0.74
VPS27P40343 SFP1YLR403W 2052 nt10.4□□□□□ -0.74
VPS27P40343 ESBP6YNL125C 2022 nt10.4□□□□□ -0.74
VPS27P40343 EMC3YKL207W 762 nt10.4□□□□□ -0.74
VPS27P40343 MAS1YLR163C 1389 nt10.39□□□□□ -0.75
VPS27P40343 THI6YPL214C 1623 nt10.39□□□□□ -0.75
VPS27P40343 TPN1YGL186C 1740 nt10.38□□□□□ -0.75
VPS27P40343 RSM7YJR113C 744 nt10.38□□□□□ -0.75
VPS27P40343 AAC3YBR085W 924 nt10.38□□□□□ -0.75
VPS27P40343 YCR025CYCR025C 411 nt10.36□□□□□ -0.75
VPS27P40343 LYS20YDL182W 1287 nt10.36□□□□□ -0.75
VPS27P40343 YFR020WYFR020W 699 nt10.36□□□□□ -0.75
VPS27P40343 YLR280CYLR280C 351 nt10.35□□□□□ -0.75
VPS27P40343 MCM5YLR274W 2328 nt10.35□□□□□ -0.75
VPS27P40343 CYC3YAL039C 810 nt10.34□□□□□ -0.75
VPS27P40343 YJL009WYJL009W 327 nt10.33□□□□□ -0.76
VPS27P40343 PAU19YMR325W 375 nt10.33□□□□□ -0.76
VPS27P40343 snR86snR86 1004 nt10.32□□□□□ -0.76
VPS27P40343 YJR149WYJR149W 1215 nt10.32□□□□□ -0.76
VPS27P40343 HXT11YOL156W 1704 nt10.32□□□□□ -0.76
VPS27P40343 TMS1YDR105C 1422 nt10.32□□□□□ -0.76
VPS27P40343 tD(GUC)BtD(GUC)B 72 nt10.31□□□□□ -0.76
VPS27P40343 tD(GUC)DtD(GUC)D 72 nt10.31□□□□□ -0.76
VPS27P40343 tD(GUC)G1tD(GUC)G1 72 nt10.31□□□□□ -0.76
VPS27P40343 tD(GUC)G2tD(GUC)G2 72 nt10.31□□□□□ -0.76
VPS27P40343 tD(GUC)I1tD(GUC)I1 72 nt10.31□□□□□ -0.76
VPS27P40343 tD(GUC)I2tD(GUC)I2 72 nt10.31□□□□□ -0.76
VPS27P40343 tD(GUC)J1tD(GUC)J1 72 nt10.31□□□□□ -0.76
VPS27P40343 tD(GUC)J2tD(GUC)J2 72 nt10.31□□□□□ -0.76
VPS27P40343 tD(GUC)J3tD(GUC)J3 72 nt10.31□□□□□ -0.76
VPS27P40343 tD(GUC)J4tD(GUC)J4 72 nt10.31□□□□□ -0.76
VPS27P40343 tD(GUC)KtD(GUC)K 72 nt10.31□□□□□ -0.76
VPS27P40343 tD(GUC)L1tD(GUC)L1 72 nt10.31□□□□□ -0.76
VPS27P40343 tD(GUC)L2tD(GUC)L2 72 nt10.31□□□□□ -0.76
VPS27P40343 tD(GUC)MtD(GUC)M 72 nt10.31□□□□□ -0.76
VPS27P40343 tD(GUC)OtD(GUC)O 72 nt10.31□□□□□ -0.76
VPS27P40343 HEM14YER014W 1620 nt10.3□□□□□ -0.76
VPS27P40343 MEP1YGR121C 1479 nt10.28□□□□□ -0.76
VPS27P40343 ERO1YML130C 1692 nt10.28□□□□□ -0.76
VPS27P40343 SRP102YKL154W 735 nt10.27□□□□□ -0.77
VPS27P40343 NAP1YKR048C 1254 nt10.27□□□□□ -0.77
VPS27P40343 YRF1-2YER190W 5046 nt10.27□□□□□ -0.77
VPS27P40343 SRM1YGL097W 1449 nt10.26□□□□□ -0.77
VPS27P40343 YOR072WYOR072W 315 nt10.26□□□□□ -0.77
VPS27P40343 SER2YGR208W 930 nt10.24□□□□□ -0.77
VPS27P40343 MIM1YOL026C 342 nt10.24□□□□□ -0.77
VPS27P40343 YLR072WYLR072W 2082 nt10.23□□□□□ -0.77
VPS27P40343 TGA1tA(UGC)A 73 nt10.23□□□□□ -0.77
VPS27P40343 tA(UGC)EtA(UGC)E 73 nt10.23□□□□□ -0.77
VPS27P40343 tA(UGC)GtA(UGC)G 73 nt10.23□□□□□ -0.77
VPS27P40343 tA(UGC)LtA(UGC)L 73 nt10.23□□□□□ -0.77
VPS27P40343 tA(UGC)OtA(UGC)O 73 nt10.23□□□□□ -0.77
VPS27P40343 YIR035CYIR035C 765 nt10.23□□□□□ -0.77
VPS27P40343 YLR460CYLR460C 1131 nt10.23□□□□□ -0.77
VPS27P40343 BUB2YMR055C 921 nt10.22□□□□□ -0.77
VPS27P40343 HMG2YLR450W 3138 nt10.22□□□□□ -0.77
VPS27P40343 ALD5YER073W 1563 nt10.22□□□□□ -0.77
VPS27P40343 DTR1YBR180W 1719 nt10.21□□□□□ -0.77
VPS27P40343 YBR056WYBR056W 1506 nt10.21□□□□□ -0.78
VPS27P40343 YGR210CYGR210C 1236 nt10.2□□□□□ -0.78
VPS27P40343 PUP1YOR157C 786 nt10.2□□□□□ -0.78
VPS27P40343 HXK1YFR053C 1458 nt10.19□□□□□ -0.78
VPS27P40343 YMR210WYMR210W 1350 nt10.19□□□□□ -0.78
VPS27P40343 MET22YOL064C 1074 nt10.19□□□□□ -0.78
VPS27P40343 LEA1YPL213W 717 nt10.18□□□□□ -0.78
VPS27P40343 FTH1YBR207W 1398 nt10.17□□□□□ -0.78
VPS27P40343 CHS7YHR142W 951 nt10.17□□□□□ -0.78
VPS27P40343 SLG1YOR008C 1137 nt10.17□□□□□ -0.78
VPS27P40343 FCY1YPR062W 477 nt10.17□□□□□ -0.78
VPS27P40343 HTS1YPR033C 1641 nt10.17□□□□□ -0.78
VPS27P40343 ABP1YCR088W 1779 nt10.16□□□□□ -0.78
VPS27P40343 ILV2YMR108W 2064 nt10.16□□□□□ -0.78
VPS27P40343 RNA170RNA170 169 nt10.16□□□□□ -0.78
VPS27P40343 OLA1YBR025C 1185 nt10.16□□□□□ -0.78
Retrieved 100 of 7,029 protein–RNA pairs in 8.8 ms