Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 DCN-207ENST00000546370 586 ntTSL 3 BASIC6.61□□□□□ -1.35
SNX18Q96RF0 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC6.61□□□□□ -1.35
SNX18Q96RF0 MTND4LP25-201ENST00000570218 163 ntBASIC6.61□□□□□ -1.35
SNX18Q96RF0 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
SNX18Q96RF0 MIR4685-201ENST00000578185 69 ntBASIC6.61□□□□□ -1.35
SNX18Q96RF0 AC100832.2-201ENST00000582080 776 ntBASIC6.61□□□□□ -1.35
SNX18Q96RF0 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC6.61□□□□□ -1.35
SNX18Q96RF0 ZNF675-202ENST00000596211 581 ntTSL 4 BASIC6.61□□□□□ -1.35
SNX18Q96RF0 PRR13P3-201ENST00000603578 376 ntBASIC6.61□□□□□ -1.35
SNX18Q96RF0 RPAP2P1-201ENST00000603626 1168 ntBASIC6.61□□□□□ -1.35
SNX18Q96RF0 AC022387.2-201ENST00000604050 448 ntBASIC6.61□□□□□ -1.35
SNX18Q96RF0 AC004852.1-201ENST00000605206 154 ntBASIC6.61□□□□□ -1.35
SNX18Q96RF0 CUX2P1-201ENST00000606426 298 ntBASIC6.61□□□□□ -1.35
SNX18Q96RF0 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC6.61□□□□□ -1.35
SNX18Q96RF0 AC097381.3-201ENST00000608962 462 ntBASIC6.61□□□□□ -1.35
SNX18Q96RF0 AP003068.4-201ENST00000623192 802 ntBASIC6.61□□□□□ -1.35
SNX18Q96RF0 METAP1-212ENST00000625963 147 ntTSL 5 BASIC6.61□□□□□ -1.35
SNX18Q96RF0 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SNX18Q96RF0 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SNX18Q96RF0 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SNX18Q96RF0 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SNX18Q96RF0 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
SNX18Q96RF0 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SNX18Q96RF0 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6.61□□□□□ -1.35
SNX18Q96RF0 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SNX18Q96RF0 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SNX18Q96RF0 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SNX18Q96RF0 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SNX18Q96RF0 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC6.61□□□□□ -1.35
SNX18Q96RF0 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
SNX18Q96RF0 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC6.61□□□□□ -1.35
SNX18Q96RF0 FTO-203ENST00000460382 1517 ntTSL 5 BASIC6.6□□□□□ -1.35
SNX18Q96RF0 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.6□□□□□ -1.35
SNX18Q96RF0 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SNX18Q96RF0 MBNL3-203ENST00000370849 1444 ntTSL 2 BASIC6.6□□□□□ -1.35
SNX18Q96RF0 TRIM60P14-201ENST00000513444 1419 ntBASIC6.6□□□□□ -1.35
SNX18Q96RF0 NUMB-231ENST00000559312 1439 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SNX18Q96RF0 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
SNX18Q96RF0 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
SNX18Q96RF0 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SNX18Q96RF0 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SNX18Q96RF0 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SNX18Q96RF0 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC6.6□□□□□ -1.35
SNX18Q96RF0 OR1C1-201ENST00000408896 1307 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
SNX18Q96RF0 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.6□□□□□ -1.35
SNX18Q96RF0 INSL5-201ENST00000304526 715 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SNX18Q96RF0 ALOX5AP-201ENST00000380490 904 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SNX18Q96RF0 C1QTNF9B-203ENST00000382145 888 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SNX18Q96RF0 MT-RNR1-201ENST00000389680 954 ntBASIC6.6□□□□□ -1.35
SNX18Q96RF0 RPL36A-202ENST00000392994 691 ntTSL 2 BASIC6.6□□□□□ -1.35
SNX18Q96RF0 NHP2P2-201ENST00000396362 460 ntBASIC6.6□□□□□ -1.35
SNX18Q96RF0 LINC00159-202ENST00000414877 428 ntTSL 4 BASIC6.6□□□□□ -1.35
SNX18Q96RF0 AC023141.10-201ENST00000415634 200 ntBASIC6.6□□□□□ -1.35
SNX18Q96RF0 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.6□□□□□ -1.35
SNX18Q96RF0 AL596451.1-201ENST00000419824 572 ntTSL 5 BASIC6.6□□□□□ -1.35
SNX18Q96RF0 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC6.6□□□□□ -1.35
SNX18Q96RF0 VN1R53P-201ENST00000429536 957 ntBASIC6.6□□□□□ -1.35
SNX18Q96RF0 CYP2C56P-201ENST00000440076 291 ntBASIC6.6□□□□□ -1.35
SNX18Q96RF0 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC6.6□□□□□ -1.35
SNX18Q96RF0 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC6.6□□□□□ -1.35
SNX18Q96RF0 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
SNX18Q96RF0 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC6.6□□□□□ -1.35
SNX18Q96RF0 AC016489.1-201ENST00000461109 375 ntBASIC6.6□□□□□ -1.35
SNX18Q96RF0 RN7SL834P-201ENST00000461450 286 ntBASIC6.6□□□□□ -1.35
SNX18Q96RF0 PDE4DIP-208ENST00000464103 1055 ntTSL 5 BASIC6.6□□□□□ -1.35
SNX18Q96RF0 RPL23P10-201ENST00000468780 412 ntBASIC6.6□□□□□ -1.35
SNX18Q96RF0 AC007849.1-201ENST00000469794 513 ntTSL 4 BASIC6.6□□□□□ -1.35
SNX18Q96RF0 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC6.6□□□□□ -1.35
SNX18Q96RF0 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC6.6□□□□□ -1.35
SNX18Q96RF0 AC106774.2-201ENST00000510266 406 ntBASIC6.6□□□□□ -1.35
SNX18Q96RF0 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC6.6□□□□□ -1.35
SNX18Q96RF0 RPL10P18-201ENST00000519384 309 ntBASIC6.6□□□□□ -1.35
SNX18Q96RF0 AC084361.1-201ENST00000537730 607 ntTSL 3 BASIC6.6□□□□□ -1.35
SNX18Q96RF0 HNRNPC-226ENST00000556628 1156 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SNX18Q96RF0 AC090330.1-201ENST00000588646 764 ntBASIC6.6□□□□□ -1.35
SNX18Q96RF0 AC010618.2-201ENST00000596192 460 ntTSL 3 BASIC6.6□□□□□ -1.35
SNX18Q96RF0 AP005329.3-201ENST00000609924 686 ntBASIC6.6□□□□□ -1.35
SNX18Q96RF0 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC6.6□□□□□ -1.35
SNX18Q96RF0 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC6.6□□□□□ -1.35
SNX18Q96RF0 AC104073.4-201ENST00000632111 598 ntTSL 2 BASIC6.6□□□□□ -1.35
SNX18Q96RF0 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC6.6□□□□□ -1.35
SNX18Q96RF0 OR10G8-202ENST00000641224 1033 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
SNX18Q96RF0 CASC19-232ENST00000641480 1244 ntBASIC6.6□□□□□ -1.35
SNX18Q96RF0 AL596275.2-203ENST00000641951 371 ntBASIC6.6□□□□□ -1.35
SNX18Q96RF0 AC069222.1-201ENST00000608028 3360 ntBASIC6.6□□□□□ -1.35
SNX18Q96RF0 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SNX18Q96RF0 AC097634.1-201ENST00000604491 2467 ntBASIC6.6□□□□□ -1.35
SNX18Q96RF0 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SNX18Q96RF0 AL450426.1-201ENST00000635678 1602 ntTSL 5 BASIC6.6□□□□□ -1.35
SNX18Q96RF0 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
SNX18Q96RF0 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SNX18Q96RF0 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.6□□□□□ -1.35
SNX18Q96RF0 CYP19A1-216ENST00000559878 1958 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SNX18Q96RF0 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SNX18Q96RF0 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SNX18Q96RF0 AC100810.3-201ENST00000633189 2240 ntBASIC6.6□□□□□ -1.35
SNX18Q96RF0 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC6.6□□□□□ -1.35
SNX18Q96RF0 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SNX18Q96RF0 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SNX18Q96RF0 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 141 ms