Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.28
BHLHA9Q7RTU4 FANCD2P2-201ENST00000437591 1400 ntBASIC7.09□□□□□ -1.28
BHLHA9Q7RTU4 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.28
BHLHA9Q7RTU4 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.28
BHLHA9Q7RTU4 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
BHLHA9Q7RTU4 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
BHLHA9Q7RTU4 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
BHLHA9Q7RTU4 AC007993.1-201ENST00000621298 2430 ntBASIC7.08□□□□□ -1.28
BHLHA9Q7RTU4 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC7.08□□□□□ -1.28
BHLHA9Q7RTU4 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC7.08□□□□□ -1.28
BHLHA9Q7RTU4 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC7.08□□□□□ -1.28
BHLHA9Q7RTU4 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
BHLHA9Q7RTU4 AC004023.1-201ENST00000561473 1744 ntBASIC7.08□□□□□ -1.28
BHLHA9Q7RTU4 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC7.08□□□□□ -1.28
BHLHA9Q7RTU4 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
BHLHA9Q7RTU4 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
BHLHA9Q7RTU4 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
BHLHA9Q7RTU4 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
BHLHA9Q7RTU4 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
BHLHA9Q7RTU4 METTL5-202ENST00000308099 629 ntTSL 3 BASIC7.08□□□□□ -1.28
BHLHA9Q7RTU4 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
BHLHA9Q7RTU4 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
BHLHA9Q7RTU4 AC010740.1-201ENST00000417035 684 ntBASIC7.08□□□□□ -1.28
BHLHA9Q7RTU4 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC7.08□□□□□ -1.28
BHLHA9Q7RTU4 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
BHLHA9Q7RTU4 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC7.08□□□□□ -1.28
BHLHA9Q7RTU4 PFN1P11-201ENST00000445829 389 ntBASIC7.08□□□□□ -1.28
BHLHA9Q7RTU4 RN7SKP198-201ENST00000459286 306 ntBASIC7.08□□□□□ -1.28
BHLHA9Q7RTU4 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC7.08□□□□□ -1.28
BHLHA9Q7RTU4 RPL5P33-201ENST00000487833 905 ntBASIC7.08□□□□□ -1.28
BHLHA9Q7RTU4 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC7.08□□□□□ -1.28
BHLHA9Q7RTU4 IGLVVII-41-1-201ENST00000518405 151 ntBASIC7.08□□□□□ -1.28
BHLHA9Q7RTU4 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC7.08□□□□□ -1.28
BHLHA9Q7RTU4 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC7.08□□□□□ -1.28
BHLHA9Q7RTU4 SNRPCP6-201ENST00000528310 210 ntBASIC7.08□□□□□ -1.28
BHLHA9Q7RTU4 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
BHLHA9Q7RTU4 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC7.08□□□□□ -1.28
BHLHA9Q7RTU4 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC7.08□□□□□ -1.28
BHLHA9Q7RTU4 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC7.08□□□□□ -1.28
BHLHA9Q7RTU4 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
BHLHA9Q7RTU4 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
BHLHA9Q7RTU4 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC7.08□□□□□ -1.28
BHLHA9Q7RTU4 RPL29P33-201ENST00000587474 316 ntBASIC7.08□□□□□ -1.28
BHLHA9Q7RTU4 MIR6885-201ENST00000612241 66 ntBASIC7.08□□□□□ -1.28
BHLHA9Q7RTU4 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC7.08□□□□□ -1.28
BHLHA9Q7RTU4 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC7.08□□□□□ -1.28
BHLHA9Q7RTU4 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
BHLHA9Q7RTU4 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
BHLHA9Q7RTU4 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC7.08□□□□□ -1.28
BHLHA9Q7RTU4 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC7.08□□□□□ -1.28
BHLHA9Q7RTU4 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC7.08□□□□□ -1.28
BHLHA9Q7RTU4 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
BHLHA9Q7RTU4 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
BHLHA9Q7RTU4 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
BHLHA9Q7RTU4 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
BHLHA9Q7RTU4 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
BHLHA9Q7RTU4 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
BHLHA9Q7RTU4 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
BHLHA9Q7RTU4 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
BHLHA9Q7RTU4 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
BHLHA9Q7RTU4 MEP1B-201ENST00000269202 2312 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
BHLHA9Q7RTU4 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
BHLHA9Q7RTU4 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
BHLHA9Q7RTU4 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
BHLHA9Q7RTU4 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
BHLHA9Q7RTU4 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
BHLHA9Q7RTU4 TBC1D5-209ENST00000429383 3156 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
BHLHA9Q7RTU4 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
BHLHA9Q7RTU4 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
BHLHA9Q7RTU4 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
BHLHA9Q7RTU4 OR1L8-202ENST00000641027 2024 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
BHLHA9Q7RTU4 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC7.07□□□□□ -1.28
BHLHA9Q7RTU4 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC7.07□□□□□ -1.28
BHLHA9Q7RTU4 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
BHLHA9Q7RTU4 CYCSP17-201ENST00000407870 315 ntBASIC7.07□□□□□ -1.28
BHLHA9Q7RTU4 GAPDHP57-201ENST00000424400 585 ntBASIC7.07□□□□□ -1.28
BHLHA9Q7RTU4 DUTP4-201ENST00000424782 475 ntBASIC7.07□□□□□ -1.28
BHLHA9Q7RTU4 AL589794.1-201ENST00000424971 390 ntBASIC7.07□□□□□ -1.28
BHLHA9Q7RTU4 AC091390.2-201ENST00000432573 374 ntBASIC7.07□□□□□ -1.28
BHLHA9Q7RTU4 ATP6V1G1P4-201ENST00000438388 335 ntBASIC7.07□□□□□ -1.28
BHLHA9Q7RTU4 RN7SL83P-201ENST00000468131 297 ntBASIC7.07□□□□□ -1.28
BHLHA9Q7RTU4 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC7.07□□□□□ -1.28
BHLHA9Q7RTU4 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC7.07□□□□□ -1.28
BHLHA9Q7RTU4 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC7.07□□□□□ -1.28
BHLHA9Q7RTU4 AC011352.2-201ENST00000514574 1016 ntBASIC7.07□□□□□ -1.28
BHLHA9Q7RTU4 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
BHLHA9Q7RTU4 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC7.07□□□□□ -1.28
BHLHA9Q7RTU4 TBCA-209ENST00000522370 435 ntTSL 3 BASIC7.07□□□□□ -1.28
BHLHA9Q7RTU4 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC7.07□□□□□ -1.28
BHLHA9Q7RTU4 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC7.07□□□□□ -1.28
BHLHA9Q7RTU4 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC7.07□□□□□ -1.28
BHLHA9Q7RTU4 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms