Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC6.86□□□□□ -1.31
ZNF549Q6P9A3 COX6CP16-201ENST00000603667 216 ntBASIC6.86□□□□□ -1.31
ZNF549Q6P9A3 AL035410.2-201ENST00000604963 864 ntBASIC6.86□□□□□ -1.31
ZNF549Q6P9A3 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC6.86□□□□□ -1.31
ZNF549Q6P9A3 AC026951.2-201ENST00000613847 241 ntBASIC6.86□□□□□ -1.31
ZNF549Q6P9A3 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
ZNF549Q6P9A3 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
ZNF549Q6P9A3 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
ZNF549Q6P9A3 AC110597.1-201ENST00000562669 3176 ntBASIC6.86□□□□□ -1.31
ZNF549Q6P9A3 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
ZNF549Q6P9A3 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ZNF549Q6P9A3 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ZNF549Q6P9A3 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ZNF549Q6P9A3 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.86□□□□□ -1.31
ZNF549Q6P9A3 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
ZNF549Q6P9A3 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
ZNF549Q6P9A3 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ZNF549Q6P9A3 CLCA3P-203ENST00000490028 2781 ntBASIC6.86□□□□□ -1.31
ZNF549Q6P9A3 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.85□□□□□ -1.31
ZNF549Q6P9A3 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
ZNF549Q6P9A3 CA10-204ENST00000570565 2276 ntTSL 5 BASIC6.85□□□□□ -1.31
ZNF549Q6P9A3 EIF3EP2-201ENST00000423042 1814 ntBASIC6.85□□□□□ -1.31
ZNF549Q6P9A3 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC6.85□□□□□ -1.31
ZNF549Q6P9A3 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
ZNF549Q6P9A3 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
ZNF549Q6P9A3 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
ZNF549Q6P9A3 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
ZNF549Q6P9A3 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
ZNF549Q6P9A3 MIR301B-201ENST00000390813 78 ntBASIC6.85□□□□□ -1.31
ZNF549Q6P9A3 AL359715.1-201ENST00000404330 555 ntBASIC6.85□□□□□ -1.31
ZNF549Q6P9A3 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
ZNF549Q6P9A3 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
ZNF549Q6P9A3 AL359633.1-201ENST00000421403 310 ntBASIC6.85□□□□□ -1.31
ZNF549Q6P9A3 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC6.85□□□□□ -1.31
ZNF549Q6P9A3 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC6.85□□□□□ -1.31
ZNF549Q6P9A3 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC6.85□□□□□ -1.31
ZNF549Q6P9A3 RN7SL149P-201ENST00000465197 281 ntBASIC6.85□□□□□ -1.31
ZNF549Q6P9A3 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC6.85□□□□□ -1.31
ZNF549Q6P9A3 RN7SL705P-201ENST00000481678 294 ntBASIC6.85□□□□□ -1.31
ZNF549Q6P9A3 ENPP7P3-201ENST00000509123 241 ntBASIC6.85□□□□□ -1.31
ZNF549Q6P9A3 ACTR6P1-201ENST00000514311 1104 ntBASIC6.85□□□□□ -1.31
ZNF549Q6P9A3 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC6.85□□□□□ -1.31
ZNF549Q6P9A3 AC107952.1-201ENST00000524200 376 ntBASIC6.85□□□□□ -1.31
ZNF549Q6P9A3 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC6.85□□□□□ -1.31
ZNF549Q6P9A3 LINC02424-201ENST00000548512 1264 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
ZNF549Q6P9A3 AC002044.3-201ENST00000623314 541 ntBASIC6.85□□□□□ -1.31
ZNF549Q6P9A3 AC087821.1-201ENST00000623639 567 ntBASIC6.85□□□□□ -1.31
ZNF549Q6P9A3 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
ZNF549Q6P9A3 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
ZNF549Q6P9A3 AL391262.1-201ENST00000556558 1992 ntBASIC6.85□□□□□ -1.31
ZNF549Q6P9A3 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
ZNF549Q6P9A3 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
ZNF549Q6P9A3 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.85□□□□□ -1.31
ZNF549Q6P9A3 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
ZNF549Q6P9A3 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
ZNF549Q6P9A3 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
ZNF549Q6P9A3 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
ZNF549Q6P9A3 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
ZNF549Q6P9A3 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
ZNF549Q6P9A3 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
ZNF549Q6P9A3 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
ZNF549Q6P9A3 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC6.85□□□□□ -1.31
ZNF549Q6P9A3 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
ZNF549Q6P9A3 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
ZNF549Q6P9A3 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.85□□□□□ -1.31
ZNF549Q6P9A3 FAM20A-207ENST00000619787 2798 ntTSL 5 BASIC6.85□□□□□ -1.31
ZNF549Q6P9A3 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.85□□□□□ -1.31
ZNF549Q6P9A3 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC6.85□□□□□ -1.31
ZNF549Q6P9A3 USP48-203ENST00000374732 3037 ntTSL 2 BASIC6.84□□□□□ -1.31
ZNF549Q6P9A3 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.84□□□□□ -1.31
ZNF549Q6P9A3 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
ZNF549Q6P9A3 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.84□□□□□ -1.31
ZNF549Q6P9A3 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
ZNF549Q6P9A3 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
ZNF549Q6P9A3 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
ZNF549Q6P9A3 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC6.84□□□□□ -1.31
ZNF549Q6P9A3 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
ZNF549Q6P9A3 TRDMT1-210ENST00000488990 1301 ntTSL 2 BASIC6.84□□□□□ -1.31
ZNF549Q6P9A3 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC6.84□□□□□ -1.31
ZNF549Q6P9A3 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC6.84□□□□□ -1.31
ZNF549Q6P9A3 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
ZNF549Q6P9A3 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
ZNF549Q6P9A3 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC6.84□□□□□ -1.31
ZNF549Q6P9A3 AL080312.1-201ENST00000256654 824 ntBASIC6.84□□□□□ -1.31
ZNF549Q6P9A3 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
ZNF549Q6P9A3 AC023886.2-201ENST00000321285 411 ntBASIC6.84□□□□□ -1.31
ZNF549Q6P9A3 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
ZNF549Q6P9A3 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
ZNF549Q6P9A3 SNORA11D-201ENST00000408548 128 ntBASIC6.84□□□□□ -1.31
ZNF549Q6P9A3 SNORA11E-201ENST00000408778 128 ntBASIC6.84□□□□□ -1.31
ZNF549Q6P9A3 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
ZNF549Q6P9A3 RPSAP60-201ENST00000415403 880 ntBASIC6.84□□□□□ -1.31
ZNF549Q6P9A3 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC6.84□□□□□ -1.31
ZNF549Q6P9A3 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.31
ZNF549Q6P9A3 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
ZNF549Q6P9A3 ARPP21-217ENST00000436702 561 ntTSL 4 BASIC6.84□□□□□ -1.31
ZNF549Q6P9A3 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC6.84□□□□□ -1.31
ZNF549Q6P9A3 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC6.84□□□□□ -1.31
ZNF549Q6P9A3 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC6.84□□□□□ -1.31
ZNF549Q6P9A3 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms