Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 OR5M2P-202ENST00000641241 4242 ntBASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 C1D-202ENST00000407324 1379 ntTSL 3 BASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 RPLP1P10-201ENST00000413972 339 ntBASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 AC091492.1-201ENST00000419844 272 ntBASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 BMS1P11-201ENST00000442351 885 ntBASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 RBMY3AP-201ENST00000449381 1145 ntBASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 GOT2P2-201ENST00000450663 1251 ntBASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 AGKP1-201ENST00000455254 1263 ntBASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 BMS1P9-201ENST00000457640 885 ntBASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 RN7SL160P-201ENST00000468558 284 ntBASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 AC253576.1-201ENST00000511645 1156 ntBASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 AC131935.1-201ENST00000524621 333 ntBASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 OR4A1P-201ENST00000532342 920 ntBASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 RAB30-209ENST00000532548 644 ntTSL 3 BASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 AC089984.3-201ENST00000552838 363 ntBASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 ARGFXP2-201ENST00000579304 949 ntBASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 AC011447.2-201ENST00000592921 283 ntBASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 AC104184.1-201ENST00000607513 721 ntBASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 AL049541.2-201ENST00000626377 555 ntBASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 AL390036.1-203ENST00000635340 894 ntTSL 5 BASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 AL133243.4-201ENST00000623116 3109 ntBASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 AC079178.2-201ENST00000439323 1624 ntBASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 OFD1P10Y-201ENST00000434110 1433 ntBASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 CAST-228ENST00000509903 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
H3F3CQ6NXT2 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC6.49□□□□□ -1.37
H3F3CQ6NXT2 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
H3F3CQ6NXT2 AC007998.4-201ENST00000612496 2533 ntBASIC6.49□□□□□ -1.37
H3F3CQ6NXT2 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
H3F3CQ6NXT2 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.49□□□□□ -1.37
H3F3CQ6NXT2 CCDC150P1-201ENST00000537123 2215 ntBASIC6.49□□□□□ -1.37
H3F3CQ6NXT2 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
H3F3CQ6NXT2 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.49□□□□□ -1.37
H3F3CQ6NXT2 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC6.49□□□□□ -1.37
H3F3CQ6NXT2 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC6.49□□□□□ -1.37
H3F3CQ6NXT2 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
H3F3CQ6NXT2 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC6.49□□□□□ -1.37
H3F3CQ6NXT2 TRIM53CP-201ENST00000531490 1354 ntBASIC6.49□□□□□ -1.37
H3F3CQ6NXT2 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC6.49□□□□□ -1.37
H3F3CQ6NXT2 PRKAA1-201ENST00000296800 1134 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
H3F3CQ6NXT2 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
H3F3CQ6NXT2 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC6.49□□□□□ -1.37
H3F3CQ6NXT2 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC6.49□□□□□ -1.37
H3F3CQ6NXT2 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
H3F3CQ6NXT2 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC6.49□□□□□ -1.37
H3F3CQ6NXT2 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
H3F3CQ6NXT2 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
H3F3CQ6NXT2 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.49□□□□□ -1.37
H3F3CQ6NXT2 RPL18AP14-201ENST00000417685 526 ntBASIC6.49□□□□□ -1.37
H3F3CQ6NXT2 AC007365.2-201ENST00000428806 458 ntBASIC6.49□□□□□ -1.37
H3F3CQ6NXT2 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC6.49□□□□□ -1.37
H3F3CQ6NXT2 MYL6P3-201ENST00000436904 432 ntBASIC6.49□□□□□ -1.37
H3F3CQ6NXT2 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC6.49□□□□□ -1.37
H3F3CQ6NXT2 PRDX1P1-201ENST00000449329 596 ntBASIC6.49□□□□□ -1.37
H3F3CQ6NXT2 CEACAMP11-201ENST00000455211 583 ntBASIC6.49□□□□□ -1.37
H3F3CQ6NXT2 VN1R6P-201ENST00000458417 907 ntBASIC6.49□□□□□ -1.37
H3F3CQ6NXT2 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
H3F3CQ6NXT2 AC063955.1-201ENST00000462872 685 ntBASIC6.49□□□□□ -1.37
H3F3CQ6NXT2 RN7SL790P-201ENST00000474043 298 ntBASIC6.49□□□□□ -1.37
H3F3CQ6NXT2 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.49□□□□□ -1.37
H3F3CQ6NXT2 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
H3F3CQ6NXT2 RPL12P7-201ENST00000493832 494 ntBASIC6.49□□□□□ -1.37
H3F3CQ6NXT2 RN7SL612P-201ENST00000497704 295 ntBASIC6.49□□□□□ -1.37
H3F3CQ6NXT2 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC6.49□□□□□ -1.37
H3F3CQ6NXT2 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC6.49□□□□□ -1.37
H3F3CQ6NXT2 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC6.49□□□□□ -1.37
H3F3CQ6NXT2 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms