Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC6.48□□□□□ -1.37
RFC3P40938 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC6.48□□□□□ -1.37
RFC3P40938 RPL12P1-201ENST00000374520 498 ntBASIC6.48□□□□□ -1.37
RFC3P40938 MIR152-201ENST00000385212 87 ntBASIC6.48□□□□□ -1.37
RFC3P40938 RNU1-56P-201ENST00000391303 164 ntBASIC6.48□□□□□ -1.37
RFC3P40938 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
RFC3P40938 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC6.48□□□□□ -1.37
RFC3P40938 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RFC3P40938 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC6.48□□□□□ -1.37
RFC3P40938 PSMD8P1-201ENST00000436275 769 ntBASIC6.48□□□□□ -1.37
RFC3P40938 BX005266.3-201ENST00000443013 1075 ntBASIC6.48□□□□□ -1.37
RFC3P40938 AC234771.3-201ENST00000454984 622 ntBASIC6.48□□□□□ -1.37
RFC3P40938 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC6.48□□□□□ -1.37
RFC3P40938 AC063955.1-201ENST00000462872 685 ntBASIC6.48□□□□□ -1.37
RFC3P40938 RPL23AP80-201ENST00000495605 424 ntBASIC6.48□□□□□ -1.37
RFC3P40938 TECRP2-201ENST00000503270 928 ntBASIC6.48□□□□□ -1.37
RFC3P40938 PGAM4P2-201ENST00000512491 721 ntBASIC6.48□□□□□ -1.37
RFC3P40938 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC6.48□□□□□ -1.37
RFC3P40938 AC131935.1-201ENST00000524621 333 ntBASIC6.48□□□□□ -1.37
RFC3P40938 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC6.48□□□□□ -1.37
RFC3P40938 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC6.48□□□□□ -1.37
RFC3P40938 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC6.48□□□□□ -1.37
RFC3P40938 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
RFC3P40938 AC103968.1-201ENST00000557841 573 ntBASIC6.48□□□□□ -1.37
RFC3P40938 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC6.48□□□□□ -1.37
RFC3P40938 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC6.48□□□□□ -1.37
RFC3P40938 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC6.48□□□□□ -1.37
RFC3P40938 AL049840.6-202ENST00000603373 279 ntBASIC6.48□□□□□ -1.37
RFC3P40938 AC023513.1-201ENST00000604396 691 ntBASIC6.48□□□□□ -1.37
RFC3P40938 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC6.48□□□□□ -1.37
RFC3P40938 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC6.48□□□□□ -1.37
RFC3P40938 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC6.48□□□□□ -1.37
RFC3P40938 AC135068.11-201ENST00000636378 921 ntBASIC6.48□□□□□ -1.37
RFC3P40938 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RFC3P40938 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RFC3P40938 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
RFC3P40938 CAST-228ENST00000509903 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
RFC3P40938 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
RFC3P40938 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RFC3P40938 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
RFC3P40938 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RFC3P40938 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC6.47□□□□□ -1.37
RFC3P40938 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RFC3P40938 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RFC3P40938 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC6.47□□□□□ -1.37
RFC3P40938 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RFC3P40938 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.47□□□□□ -1.37
RFC3P40938 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
RFC3P40938 RN7SKP118-201ENST00000364331 330 ntBASIC6.47□□□□□ -1.37
RFC3P40938 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
RFC3P40938 CNN3P1-201ENST00000401596 935 ntBASIC6.47□□□□□ -1.37
RFC3P40938 CNPY1-202ENST00000406197 560 ntTSL 5 BASIC6.47□□□□□ -1.37
RFC3P40938 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC6.47□□□□□ -1.37
RFC3P40938 AL672212.1-201ENST00000422246 400 ntBASIC6.47□□□□□ -1.37
RFC3P40938 EIF4A1P2-201ENST00000422633 1220 ntBASIC6.47□□□□□ -1.37
RFC3P40938 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RFC3P40938 UBQLN1P1-207ENST00000441056 1169 ntBASIC6.47□□□□□ -1.37
RFC3P40938 HMGN1P32-201ENST00000441744 256 ntBASIC6.47□□□□□ -1.37
RFC3P40938 PA2G4P1-201ENST00000442248 1197 ntBASIC6.47□□□□□ -1.37
RFC3P40938 BMS1P11-201ENST00000442351 885 ntBASIC6.47□□□□□ -1.37
RFC3P40938 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC6.47□□□□□ -1.37
RFC3P40938 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC6.47□□□□□ -1.37
RFC3P40938 BMS1P9-201ENST00000457640 885 ntBASIC6.47□□□□□ -1.37
RFC3P40938 RPL5P12-201ENST00000477071 851 ntBASIC6.47□□□□□ -1.37
RFC3P40938 RN7SL267P-201ENST00000485107 261 ntBASIC6.47□□□□□ -1.37
RFC3P40938 RN7SL655P-201ENST00000486087 298 ntBASIC6.47□□□□□ -1.37
RFC3P40938 AC074386.1-206ENST00000487102 761 ntBASIC6.47□□□□□ -1.37
RFC3P40938 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC6.47□□□□□ -1.37
RFC3P40938 AC055758.2-201ENST00000495382 799 ntTSL 2 BASIC6.47□□□□□ -1.37
RFC3P40938 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC6.47□□□□□ -1.37
RFC3P40938 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC6.47□□□□□ -1.37
RFC3P40938 AC113191.1-201ENST00000517759 403 ntBASIC6.47□□□□□ -1.37
RFC3P40938 AC100854.1-201ENST00000520351 341 ntBASIC6.47□□□□□ -1.37
RFC3P40938 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC6.47□□□□□ -1.37
RFC3P40938 CHEK2P2-201ENST00000554701 672 ntBASIC6.47□□□□□ -1.37
RFC3P40938 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC6.47□□□□□ -1.37
RFC3P40938 AC010287.1-201ENST00000566916 357 ntBASIC6.47□□□□□ -1.37
RFC3P40938 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC6.47□□□□□ -1.37
RFC3P40938 IGLJCOR18-201ENST00000584002 424 ntBASIC6.47□□□□□ -1.37
RFC3P40938 AC005479.3-201ENST00000602790 431 ntBASIC6.47□□□□□ -1.37
RFC3P40938 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC6.47□□□□□ -1.37
RFC3P40938 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RFC3P40938 MIR6813-201ENST00000621638 56 ntBASIC6.47□□□□□ -1.37
RFC3P40938 AL138693.1-201ENST00000622219 129 ntBASIC6.47□□□□□ -1.37
RFC3P40938 AC127071.1-201ENST00000624997 712 ntBASIC6.47□□□□□ -1.37
RFC3P40938 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RFC3P40938 AP002800.1-201ENST00000624982 2225 ntBASIC6.47□□□□□ -1.37
RFC3P40938 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC6.47□□□□□ -1.37
RFC3P40938 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
RFC3P40938 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
RFC3P40938 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC6.47□□□□□ -1.37
RFC3P40938 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RFC3P40938 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC6.47□□□□□ -1.37
RFC3P40938 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC6.47□□□□□ -1.37
RFC3P40938 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RFC3P40938 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RFC3P40938 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RFC3P40938 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RFC3P40938 IFT74-202ENST00000429045 1462 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RFC3P40938 AC009220.2-201ENST00000489759 1751 ntBASIC6.46□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms