Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 RN7SL88P-201ENST00000480166 299 ntBASIC5.22□□□□□ -1.57
AP1S3Q96PC3 AP005202.1-201ENST00000489915 867 ntBASIC5.22□□□□□ -1.57
AP1S3Q96PC3 PGAM4P2-201ENST00000512491 721 ntBASIC5.22□□□□□ -1.57
AP1S3Q96PC3 CCNC-215ENST00000523799 1035 ntTSL 3 BASIC5.22□□□□□ -1.57
AP1S3Q96PC3 AP003555.2-201ENST00000528507 655 ntTSL 3 BASIC5.22□□□□□ -1.57
AP1S3Q96PC3 OR9L1P-201ENST00000529493 933 ntBASIC5.22□□□□□ -1.57
AP1S3Q96PC3 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.22□□□□□ -1.57
AP1S3Q96PC3 AL591767.1-201ENST00000557160 568 ntTSL 4 BASIC5.22□□□□□ -1.57
AP1S3Q96PC3 AC009171.1-201ENST00000572673 266 ntBASIC5.22□□□□□ -1.57
AP1S3Q96PC3 RN7SL376P-201ENST00000578594 264 ntBASIC5.22□□□□□ -1.57
AP1S3Q96PC3 ZNF730-201ENST00000593635 464 ntTSL 3 BASIC5.22□□□□□ -1.57
AP1S3Q96PC3 AC074135.1-202ENST00000600223 563 ntTSL 3 BASIC5.22□□□□□ -1.57
AP1S3Q96PC3 AL137190.1-201ENST00000603288 282 ntBASIC5.22□□□□□ -1.57
AP1S3Q96PC3 AC023513.1-201ENST00000604396 691 ntBASIC5.22□□□□□ -1.57
AP1S3Q96PC3 AC016747.2-203ENST00000606876 289 ntTSL 3 BASIC5.22□□□□□ -1.57
AP1S3Q96PC3 AC008592.5-201ENST00000607856 547 ntBASIC5.22□□□□□ -1.57
AP1S3Q96PC3 AC016590.3-201ENST00000611171 753 ntBASIC5.22□□□□□ -1.57
AP1S3Q96PC3 AC012488.1-201ENST00000611221 640 ntBASIC5.22□□□□□ -1.57
AP1S3Q96PC3 AC018659.2-201ENST00000624690 715 ntBASIC5.22□□□□□ -1.57
AP1S3Q96PC3 AC093495.1-212ENST00000630173 1162 ntTSL 5 BASIC5.22□□□□□ -1.57
AP1S3Q96PC3 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC5.22□□□□□ -1.57
AP1S3Q96PC3 FAAHP1-207ENST00000635606 398 ntTSL 3 BASIC5.22□□□□□ -1.57
AP1S3Q96PC3 HCCAT5-202ENST00000642127 1029 ntBASIC5.22□□□□□ -1.57
AP1S3Q96PC3 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.22□□□□□ -1.57
AP1S3Q96PC3 AP000432.2-201ENST00000624164 2048 ntBASIC5.22□□□□□ -1.57
AP1S3Q96PC3 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC5.22□□□□□ -1.57
AP1S3Q96PC3 NCOA4P2-201ENST00000340589 1813 ntBASIC5.22□□□□□ -1.57
AP1S3Q96PC3 CLK1-215ENST00000621181 1843 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
AP1S3Q96PC3 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.22□□□□□ -1.57
AP1S3Q96PC3 CEP57L1-202ENST00000368968 1649 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
AP1S3Q96PC3 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
AP1S3Q96PC3 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
AP1S3Q96PC3 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
AP1S3Q96PC3 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
AP1S3Q96PC3 PWRN1-212ENST00000569908 1435 ntBASIC5.22□□□□□ -1.57
AP1S3Q96PC3 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC5.22□□□□□ -1.57
AP1S3Q96PC3 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
AP1S3Q96PC3 BIN2P2-201ENST00000503900 1303 ntBASIC5.22□□□□□ -1.57
AP1S3Q96PC3 C15orf41-214ENST00000569302 1325 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
AP1S3Q96PC3 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
AP1S3Q96PC3 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.21□□□□□ -1.57
AP1S3Q96PC3 ITM2A-202ENST00000434584 1698 ntTSL 2 BASIC5.21□□□□□ -1.57
AP1S3Q96PC3 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC5.21□□□□□ -1.57
AP1S3Q96PC3 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.57
AP1S3Q96PC3 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
AP1S3Q96PC3 SELE-203ENST00000367775 3389 ntTSL 5 BASIC5.21□□□□□ -1.57
AP1S3Q96PC3 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
AP1S3Q96PC3 AC123769.1-201ENST00000530992 3192 ntBASIC5.21□□□□□ -1.58
AP1S3Q96PC3 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
AP1S3Q96PC3 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.21□□□□□ -1.58
AP1S3Q96PC3 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
AP1S3Q96PC3 RBMX2P2-201ENST00000257020 946 ntBASIC5.21□□□□□ -1.58
AP1S3Q96PC3 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
AP1S3Q96PC3 RNA5SP238-201ENST00000365464 120 ntBASIC5.21□□□□□ -1.58
AP1S3Q96PC3 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
AP1S3Q96PC3 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
AP1S3Q96PC3 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC5.21□□□□□ -1.58
AP1S3Q96PC3 RPL5P27-201ENST00000437011 881 ntBASIC5.21□□□□□ -1.58
AP1S3Q96PC3 OR3B1P-201ENST00000437536 893 ntBASIC5.21□□□□□ -1.58
AP1S3Q96PC3 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC5.21□□□□□ -1.58
AP1S3Q96PC3 AL021939.1-201ENST00000441868 886 ntBASIC5.21□□□□□ -1.58
AP1S3Q96PC3 AC084809.2-201ENST00000444464 512 ntTSL 2 BASIC5.21□□□□□ -1.58
AP1S3Q96PC3 AC074257.1-201ENST00000446340 585 ntTSL 4 BASIC5.21□□□□□ -1.58
AP1S3Q96PC3 REG1CP-206ENST00000447469 496 ntBASIC5.21□□□□□ -1.58
AP1S3Q96PC3 AL353615.1-201ENST00000450850 390 ntTSL 3 BASIC5.21□□□□□ -1.58
AP1S3Q96PC3 AC007000.1-201ENST00000453064 794 ntBASIC5.21□□□□□ -1.58
AP1S3Q96PC3 RN7SL160P-201ENST00000468558 284 ntBASIC5.21□□□□□ -1.58
AP1S3Q96PC3 RPL12P5-201ENST00000475149 392 ntBASIC5.21□□□□□ -1.58
AP1S3Q96PC3 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
AP1S3Q96PC3 AC098487.1-204ENST00000506972 610 ntTSL 3 BASIC5.21□□□□□ -1.58
AP1S3Q96PC3 AP001804.1-201ENST00000526868 919 ntBASIC5.21□□□□□ -1.58
AP1S3Q96PC3 AC087241.3-201ENST00000542076 862 ntTSL 2 BASIC5.21□□□□□ -1.58
AP1S3Q96PC3 AC144548.1-201ENST00000549577 324 ntBASIC5.21□□□□□ -1.58
AP1S3Q96PC3 PFDN5-211ENST00000550846 392 ntTSL 2 BASIC5.21□□□□□ -1.58
AP1S3Q96PC3 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.21□□□□□ -1.58
AP1S3Q96PC3 TUBAP4-201ENST00000569261 416 ntBASIC5.21□□□□□ -1.58
AP1S3Q96PC3 AC005410.2-201ENST00000580270 463 ntTSL 3 BASIC5.21□□□□□ -1.58
AP1S3Q96PC3 AC004852.1-201ENST00000605206 154 ntBASIC5.21□□□□□ -1.58
AP1S3Q96PC3 AC114810.1-201ENST00000607415 473 ntBASIC5.21□□□□□ -1.58
AP1S3Q96PC3 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC5.21□□□□□ -1.58
AP1S3Q96PC3 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
AP1S3Q96PC3 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC5.21□□□□□ -1.58
AP1S3Q96PC3 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
AP1S3Q96PC3 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
AP1S3Q96PC3 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
AP1S3Q96PC3 ANGPT1-206ENST00000520734 1526 ntTSL 2 BASIC5.21□□□□□ -1.58
AP1S3Q96PC3 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
AP1S3Q96PC3 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
AP1S3Q96PC3 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
AP1S3Q96PC3 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
AP1S3Q96PC3 AC020658.2-201ENST00000559030 4020 ntBASIC5.21□□□□□ -1.58
AP1S3Q96PC3 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
AP1S3Q96PC3 KYNUP1-201ENST00000466683 1406 ntBASIC5.21□□□□□ -1.58
AP1S3Q96PC3 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
AP1S3Q96PC3 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
AP1S3Q96PC3 ATP9B-208ENST00000586722 1650 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
AP1S3Q96PC3 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
AP1S3Q96PC3 NUCB2-201ENST00000323688 1905 ntAPPRIS ALT1 TSL 2 BASIC5.21□□□□□ -1.58
AP1S3Q96PC3 CENPK-208ENST00000508421 1586 ntTSL 3 BASIC5.21□□□□□ -1.58
AP1S3Q96PC3 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms