Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 CREM-224ENST00000468236 582 ntTSL 3 BASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 DEFB109A-201ENST00000482450 265 ntBASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 AC005412.2-201ENST00000492004 341 ntBASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 RPL41-202ENST00000501597 469 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 AC005351.1-201ENST00000511152 786 ntBASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 AC010980.1-204ENST00000589724 585 ntTSL 5 BASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 MTCO2P2-201ENST00000591258 225 ntBASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 AL390058.1-201ENST00000603834 629 ntBASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 AC108451.2-201ENST00000603875 538 ntBASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 RN7SL680P-201ENST00000620379 299 ntBASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 BX005040.2-201ENST00000620504 370 ntBASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 AC104073.4-201ENST00000632111 598 ntTSL 2 BASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 AC241377.2-202ENST00000636462 997 ntBASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 TIAL1-205ENST00000436547 1401 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 AL391380.1-201ENST00000439300 1432 ntBASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 OR8D4-202ENST00000641687 2904 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 AC012321.1-201ENST00000561622 1588 ntBASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 LINC01588-202ENST00000528300 3208 ntTSL 2 BASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 CDH18-201ENST00000274170 2809 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 GPM6A-202ENST00000393658 2821 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 FBXL21-201ENST00000297158 1305 ntBASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 LDHA-204ENST00000396222 1766 ntTSL 2 BASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 GPR19-201ENST00000332427 1743 ntAPPRIS P1 TSL 4 BASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 Y_RNA.62-201ENST00000362840 99 ntBASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 RNA5SP260-201ENST00000363849 111 ntBASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 SFR1-201ENST00000369727 1438 ntAPPRIS P4 TSL 2 BASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 S100A13-202ENST00000392622 547 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 SOCS5P5-201ENST00000402732 1586 ntBASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 RN7SKP236-201ENST00000410635 284 ntBASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 CLIC4P3-201ENST00000422221 752 ntBASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 EEF1GP7-201ENST00000422983 703 ntBASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 OR5P4P-201ENST00000424698 917 ntBASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 AL512637.2-201ENST00000431287 1256 ntBASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 OR5M13P-201ENST00000433944 937 ntBASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 NANOGP9-201ENST00000439890 892 ntBASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 MTND2P22-201ENST00000444325 1033 ntBASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 MRPL49P1-201ENST00000505951 535 ntBASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 OSTC-204ENST00000512478 663 ntTSL 5 BASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 RN7SKP287-201ENST00000516546 266 ntBASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 AF279873.3-204ENST00000523336 784 ntTSL 2 BASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 SGK1-223ENST00000528577 1850 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 AC013457.1-201ENST00000556770 1011 ntTSL 3 BASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 AC091304.5-201ENST00000568969 158 ntBASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 EIF1-207ENST00000591776 797 ntTSL 4 BASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 OR7A1P-201ENST00000601206 970 ntBASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 AL583859.2-202ENST00000602311 505 ntTSL 5 BASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 Z99289.3-201ENST00000605586 594 ntBASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 AC073529.1-202ENST00000608576 1080 ntTSL 5 BASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 MIR7162-201ENST00000611134 69 ntBASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 AC006386.1-201ENST00000619436 415 ntBASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 AL445528.2-201ENST00000620582 470 ntBASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 AP003476.1-201ENST00000623984 516 ntBASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 OR4F15-201ENST00000332238 2119 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 PARN-201ENST00000341484 2100 ntTSL 2 BASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms