Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 RGS5-220ENST00000528689 566 ntTSL 5 BASIC7.49□□□□□ -1.21
RB1P06400 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC7.49□□□□□ -1.21
RB1P06400 AC009729.1-201ENST00000548873 1133 ntBASIC7.49□□□□□ -1.21
RB1P06400 AC105036.1-201ENST00000566222 271 ntBASIC7.49□□□□□ -1.21
RB1P06400 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC7.49□□□□□ -1.21
RB1P06400 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC7.49□□□□□ -1.21
RB1P06400 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC7.49□□□□□ -1.21
RB1P06400 WBP1LP12-201ENST00000604449 331 ntBASIC7.49□□□□□ -1.21
RB1P06400 AC068726.1-201ENST00000610993 341 ntBASIC7.49□□□□□ -1.21
RB1P06400 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RB1P06400 MIR6861-201ENST00000618657 64 ntBASIC7.49□□□□□ -1.21
RB1P06400 CASC19-232ENST00000641480 1244 ntBASIC7.49□□□□□ -1.21
RB1P06400 CASC19-274ENST00000642018 970 ntBASIC7.49□□□□□ -1.21
RB1P06400 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RB1P06400 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RB1P06400 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC7.49□□□□□ -1.21
RB1P06400 MTPN-201ENST00000393085 3738 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RB1P06400 AC061975.5-201ENST00000584928 1441 ntBASIC7.49□□□□□ -1.21
RB1P06400 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RB1P06400 IQCA1-206ENST00000431676 3069 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
RB1P06400 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC7.49□□□□□ -1.21
RB1P06400 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RB1P06400 CYP4F30P-203ENST00000438109 2250 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RB1P06400 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
RB1P06400 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC7.49□□□□□ -1.21
RB1P06400 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
RB1P06400 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RB1P06400 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RB1P06400 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC7.49□□□□□ -1.21
RB1P06400 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RB1P06400 ALB-203ENST00000415165 1483 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RB1P06400 FHL1-216ENST00000535737 2325 ntTSL 3 BASIC7.49□□□□□ -1.21
RB1P06400 CDY19P-201ENST00000411668 1613 ntBASIC7.49□□□□□ -1.21
RB1P06400 CDY18P-201ENST00000438294 1609 ntBASIC7.49□□□□□ -1.21
RB1P06400 HSP90AB7P-201ENST00000450068 2454 ntBASIC7.49□□□□□ -1.21
RB1P06400 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
RB1P06400 KLHL8-203ENST00000498875 5175 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RB1P06400 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RB1P06400 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
RB1P06400 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RB1P06400 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RB1P06400 AC007998.4-201ENST00000612496 2533 ntBASIC7.48□□□□□ -1.21
RB1P06400 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC7.48□□□□□ -1.21
RB1P06400 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RB1P06400 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC7.48□□□□□ -1.21
RB1P06400 PXT1-201ENST00000454782 2108 ntAPPRIS P2 TSL 1 (best) BASIC7.48□□□□□ -1.21
RB1P06400 EYA1-202ENST00000340726 4326 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
RB1P06400 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC7.48□□□□□ -1.21
RB1P06400 AL355375.1-201ENST00000405686 392 ntBASIC7.48□□□□□ -1.21
RB1P06400 CNPY1-202ENST00000406197 560 ntTSL 5 BASIC7.48□□□□□ -1.21
RB1P06400 EPHA4-203ENST00000409938 3363 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
RB1P06400 ATP5BP1-201ENST00000411980 1574 ntBASIC7.48□□□□□ -1.21
RB1P06400 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
RB1P06400 AC079807.1-201ENST00000429993 481 ntBASIC7.48□□□□□ -1.21
RB1P06400 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC7.48□□□□□ -1.21
RB1P06400 GAPDHP37-201ENST00000442317 968 ntBASIC7.48□□□□□ -1.21
RB1P06400 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RB1P06400 CCNJP2-201ENST00000457810 1163 ntBASIC7.48□□□□□ -1.21
RB1P06400 MTND5P12-201ENST00000502851 1449 ntBASIC7.48□□□□□ -1.21
RB1P06400 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RB1P06400 AC093816.1-201ENST00000515076 913 ntBASIC7.48□□□□□ -1.21
RB1P06400 FOXG1-AS1-203ENST00000551395 602 ntTSL 4 BASIC7.48□□□□□ -1.21
RB1P06400 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC7.48□□□□□ -1.21
RB1P06400 MMP25-AS1-206ENST00000573130 4434 ntTSL 2 BASIC7.48□□□□□ -1.21
RB1P06400 AC134669.1-201ENST00000581275 672 ntBASIC7.48□□□□□ -1.21
RB1P06400 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC7.48□□□□□ -1.21
RB1P06400 AL078623.1-201ENST00000602702 907 ntBASIC7.48□□□□□ -1.21
RB1P06400 uc_338.29-201ENST00000615099 168 ntBASIC7.48□□□□□ -1.21
RB1P06400 AC027559.1-201ENST00000636288 271 ntBASIC7.48□□□□□ -1.21
RB1P06400 MIR1910-201ENST00000636955 80 ntBASIC7.48□□□□□ -1.21
RB1P06400 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
RB1P06400 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RB1P06400 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
RB1P06400 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC7.48□□□□□ -1.21
RB1P06400 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RB1P06400 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RB1P06400 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RB1P06400 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RB1P06400 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RB1P06400 LINC01588-202ENST00000528300 3208 ntTSL 2 BASIC7.48□□□□□ -1.21
RB1P06400 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RB1P06400 CHURC1-203ENST00000549115 2629 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RB1P06400 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
RB1P06400 CXCR4-201ENST00000241393 1682 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
RB1P06400 LINC02347-201ENST00000397346 2458 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
RB1P06400 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC7.47□□□□□ -1.21
RB1P06400 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC7.47□□□□□ -1.21
RB1P06400 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
RB1P06400 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
RB1P06400 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
RB1P06400 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
RB1P06400 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
RB1P06400 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC7.47□□□□□ -1.21
RB1P06400 PART1-203ENST00000515734 2569 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
RB1P06400 MFSD8-218ENST00000641186 4448 ntBASIC7.47□□□□□ -1.21
RB1P06400 HAVCR2-201ENST00000307851 2907 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
RB1P06400 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
RB1P06400 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
RB1P06400 SNORD35A-201ENST00000363389 86 ntBASIC7.47□□□□□ -1.21
RB1P06400 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms