Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 AC027020.1-202ENST00000557839 429 ntTSL 5 BASIC5.86□□□□□ -1.47
HLA-AP01891 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC5.86□□□□□ -1.47
HLA-AP01891 MIR4262-201ENST00000578394 54 ntBASIC5.86□□□□□ -1.47
HLA-AP01891 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC5.86□□□□□ -1.47
HLA-AP01891 AC005884.1-201ENST00000588604 429 ntTSL 5 BASIC5.86□□□□□ -1.47
HLA-AP01891 AC011497.2-201ENST00000600255 639 ntBASIC5.86□□□□□ -1.47
HLA-AP01891 AC068802.1-201ENST00000603420 732 ntBASIC5.86□□□□□ -1.47
HLA-AP01891 AC120057.5-201ENST00000623840 154 ntBASIC5.86□□□□□ -1.47
HLA-AP01891 METAP1-212ENST00000625963 147 ntTSL 5 BASIC5.86□□□□□ -1.47
HLA-AP01891 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC5.86□□□□□ -1.47
HLA-AP01891 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
HLA-AP01891 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC5.86□□□□□ -1.47
HLA-AP01891 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
HLA-AP01891 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
HLA-AP01891 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC5.86□□□□□ -1.47
HLA-AP01891 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC5.86□□□□□ -1.47
HLA-AP01891 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HLA-AP01891 PARP4P1-201ENST00000435945 2337 ntBASIC5.86□□□□□ -1.47
HLA-AP01891 AP001157.1-201ENST00000550837 2339 ntBASIC5.86□□□□□ -1.47
HLA-AP01891 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HLA-AP01891 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HLA-AP01891 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HLA-AP01891 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HLA-AP01891 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
HLA-AP01891 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
HLA-AP01891 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-AP01891 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-AP01891 CCNC-204ENST00000482541 1704 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-AP01891 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-AP01891 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-AP01891 AL662795.2-201ENST00000624252 3706 ntBASIC5.85□□□□□ -1.47
HLA-AP01891 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
HLA-AP01891 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC5.85□□□□□ -1.47
HLA-AP01891 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
HLA-AP01891 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.85□□□□□ -1.47
HLA-AP01891 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-AP01891 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-AP01891 AC130456.1-201ENST00000565085 1363 ntBASIC5.85□□□□□ -1.47
HLA-AP01891 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC5.85□□□□□ -1.47
HLA-AP01891 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.85□□□□□ -1.47
HLA-AP01891 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC5.85□□□□□ -1.47
HLA-AP01891 PHF5A-201ENST00000216252 1086 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-AP01891 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
HLA-AP01891 RNA5SP448-201ENST00000363151 111 ntBASIC5.85□□□□□ -1.47
HLA-AP01891 RNA5SP238-201ENST00000365464 120 ntBASIC5.85□□□□□ -1.47
HLA-AP01891 PPCS-204ENST00000372562 966 ntTSL 2 BASIC5.85□□□□□ -1.47
HLA-AP01891 PPP1R17-202ENST00000409146 569 ntTSL 2 BASIC5.85□□□□□ -1.47
HLA-AP01891 ECHDC1-207ENST00000430841 1009 ntAPPRIS P3 TSL 5 BASIC5.85□□□□□ -1.47
HLA-AP01891 HBBP1-201ENST00000433329 439 ntBASIC5.85□□□□□ -1.47
HLA-AP01891 LINC00460-203ENST00000444865 739 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-AP01891 RPL24P8-201ENST00000446071 474 ntBASIC5.85□□□□□ -1.47
HLA-AP01891 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC5.85□□□□□ -1.47
HLA-AP01891 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC5.85□□□□□ -1.47
HLA-AP01891 AC127024.1-201ENST00000490847 418 ntBASIC5.85□□□□□ -1.47
HLA-AP01891 AC023886.1-201ENST00000506057 685 ntTSL 3 BASIC5.85□□□□□ -1.47
HLA-AP01891 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC5.85□□□□□ -1.47
HLA-AP01891 AC084361.1-201ENST00000537730 607 ntTSL 3 BASIC5.85□□□□□ -1.47
HLA-AP01891 ZNF174-205ENST00000575752 1068 ntTSL 5 BASIC5.85□□□□□ -1.47
HLA-AP01891 AC012065.3-201ENST00000602736 439 ntBASIC5.85□□□□□ -1.47
HLA-AP01891 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC5.85□□□□□ -1.47
HLA-AP01891 uc_338.21-201ENST00000622458 147 ntBASIC5.85□□□□□ -1.47
HLA-AP01891 AC005383.1-201ENST00000622689 534 ntBASIC5.85□□□□□ -1.47
HLA-AP01891 AC110769.3-201ENST00000624567 1173 ntBASIC5.85□□□□□ -1.47
HLA-AP01891 SNX18P10-201ENST00000625014 519 ntBASIC5.85□□□□□ -1.47
HLA-AP01891 AL590396.3-201ENST00000636334 300 ntBASIC5.85□□□□□ -1.47
HLA-AP01891 TMCC1P1-201ENST00000518897 1980 ntBASIC5.85□□□□□ -1.47
HLA-AP01891 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-AP01891 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.85□□□□□ -1.47
HLA-AP01891 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
HLA-AP01891 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-AP01891 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-AP01891 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.85□□□□□ -1.47
HLA-AP01891 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-AP01891 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC5.85□□□□□ -1.47
HLA-AP01891 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-AP01891 ZNF438-203ENST00000375311 2173 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
HLA-AP01891 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC5.84□□□□□ -1.47
HLA-AP01891 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HLA-AP01891 AC009120.2-204ENST00000621548 2032 ntBASIC5.84□□□□□ -1.47
HLA-AP01891 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC5.84□□□□□ -1.47
HLA-AP01891 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HLA-AP01891 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HLA-AP01891 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HLA-AP01891 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
HLA-AP01891 AL390726.6-202ENST00000635962 1365 ntTSL 5 BASIC5.84□□□□□ -1.47
HLA-AP01891 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
HLA-AP01891 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
HLA-AP01891 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HLA-AP01891 AL138847.1-201ENST00000258651 546 ntBASIC5.84□□□□□ -1.47
HLA-AP01891 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
HLA-AP01891 U3.1-201ENST00000362500 215 ntBASIC5.84□□□□□ -1.47
HLA-AP01891 RNA5SP301-201ENST00000362537 121 ntBASIC5.84□□□□□ -1.47
HLA-AP01891 RN7SKP63-201ENST00000363187 301 ntBASIC5.84□□□□□ -1.47
HLA-AP01891 RN7SKP36-201ENST00000363997 312 ntBASIC5.84□□□□□ -1.47
HLA-AP01891 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC5.84□□□□□ -1.47
HLA-AP01891 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC5.84□□□□□ -1.47
HLA-AP01891 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC5.84□□□□□ -1.47
HLA-AP01891 RN7SKP131-201ENST00000410698 301 ntBASIC5.84□□□□□ -1.47
HLA-AP01891 LINC02470-201ENST00000412084 979 ntTSL 2 BASIC5.84□□□□□ -1.47
HLA-AP01891 RPS21P8-201ENST00000413365 247 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms