Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC5.44□□□□□ -1.54
RBFOX3A6NFN3 AC243312.1-201ENST00000570582 275 ntBASIC5.44□□□□□ -1.54
RBFOX3A6NFN3 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC5.44□□□□□ -1.54
RBFOX3A6NFN3 DUSP22-216ENST00000605863 551 ntTSL 4 BASIC5.44□□□□□ -1.54
RBFOX3A6NFN3 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.44□□□□□ -1.54
RBFOX3A6NFN3 NUDT13-208ENST00000617744 928 ntTSL 5 BASIC5.44□□□□□ -1.54
RBFOX3A6NFN3 CSTL1-205ENST00000619238 477 ntTSL 5 BASIC5.44□□□□□ -1.54
RBFOX3A6NFN3 NT5C2-201ENST00000343289 3435 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RBFOX3A6NFN3 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RBFOX3A6NFN3 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RBFOX3A6NFN3 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RBFOX3A6NFN3 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
RBFOX3A6NFN3 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
RBFOX3A6NFN3 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
RBFOX3A6NFN3 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RBFOX3A6NFN3 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RBFOX3A6NFN3 AC087045.3-201ENST00000623046 2468 ntBASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 AC130456.1-201ENST00000565085 1363 ntBASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 NUMB-231ENST00000559312 1439 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 RNA5SP463-201ENST00000363030 120 ntBASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 RNA5SP65-201ENST00000363166 119 ntBASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 RN7SKP118-201ENST00000364331 330 ntBASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 AL390760.1-201ENST00000366188 410 ntTSL 5 BASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 OR2T4-201ENST00000366473 963 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 OR2T4-202ENST00000366475 1047 ntBASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 RPSAP42-201ENST00000403415 878 ntBASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 AC116036.1-201ENST00000412199 367 ntBASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 AC073367.1-201ENST00000421480 697 ntTSL 2 BASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 CDH13-203ENST00000431540 831 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 SDHCP3-201ENST00000445371 506 ntBASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 AC092687.2-201ENST00000452909 568 ntTSL 5 BASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 AC012493.1-201ENST00000453252 760 ntBASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 AL139156.3-201ENST00000454802 394 ntBASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 GCSAM-202ENST00000460387 623 ntTSL 3 BASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 PA2G4P4-201ENST00000473864 1182 ntBASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 RN7SL862P-201ENST00000491550 298 ntBASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 AC009269.1-203ENST00000496414 828 ntTSL 2 BASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 OR7E129P-201ENST00000504655 968 ntBASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 Z99943.2-201ENST00000507585 266 ntBASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 TMEM150C-203ENST00000508701 566 ntTSL 4 BASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 NTAN1P2-201ENST00000515730 940 ntBASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 IGHVII-22-1-201ENST00000517888 265 ntBASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 AC136424.1-201ENST00000518425 542 ntTSL 4 BASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 AC091175.1-201ENST00000522168 572 ntBASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 AP003385.2-201ENST00000524910 973 ntBASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 AP000911.4-201ENST00000532272 516 ntTSL 4 BASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 AP002383.5-201ENST00000542623 1161 ntBASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 ANAPC15-213ENST00000543050 807 ntTSL 3 BASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 HNRNPCP1-201ENST00000556181 766 ntBASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 CDH13-207ENST00000565636 810 ntTSL 5 BASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 LINC01255-203ENST00000587189 591 ntTSL 4 BASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 AC003002.3-201ENST00000597410 521 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 CARSP1-201ENST00000603171 889 ntBASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 AC004852.1-201ENST00000605206 154 ntBASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 AC123788.2-201ENST00000612290 283 ntBASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 AL354733.2-202ENST00000615485 742 ntTSL 5 BASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 Six3os1_4.1-201ENST00000615706 324 ntBASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 AC007485.2-201ENST00000623493 1667 ntBASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 FAM122C-202ENST00000370785 1344 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.43□□□□□ -1.54
RBFOX3A6NFN3 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 AC119674.1-213ENST00000641177 1386 ntBASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 PIK3C3-204ENST00000586545 1554 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 AC011369.2-201ENST00000624423 1567 ntBASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 OCM-201ENST00000242104 695 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 OR1J4-201ENST00000340750 942 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 RNA5SP378-201ENST00000363646 120 ntBASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 RN7SKP107-201ENST00000364157 290 ntBASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 TCTE3-201ENST00000366774 769 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 IGKV3D-11-201ENST00000390277 444 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
RBFOX3A6NFN3 PHBP1-201ENST00000392260 808 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms