Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 RPL17P2-201ENST00000491913 451 ntBASIC5.65□□□□□ -1.5
RCL1Q9Y2P8 NMNAT1P4-201ENST00000505598 840 ntBASIC5.65□□□□□ -1.5
RCL1Q9Y2P8 LINC01411-204ENST00000510234 938 ntTSL 3 BASIC5.65□□□□□ -1.5
RCL1Q9Y2P8 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC5.65□□□□□ -1.5
RCL1Q9Y2P8 AP000873.4-201ENST00000528133 905 ntTSL 3 BASIC5.65□□□□□ -1.5
RCL1Q9Y2P8 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC5.65□□□□□ -1.5
RCL1Q9Y2P8 RAP1B-230ENST00000543697 734 ntTSL 3 BASIC5.65□□□□□ -1.5
RCL1Q9Y2P8 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC5.65□□□□□ -1.5
RCL1Q9Y2P8 AC130324.2-201ENST00000580873 638 ntTSL 2 BASIC5.65□□□□□ -1.5
RCL1Q9Y2P8 RN7SL667P-201ENST00000582817 298 ntBASIC5.65□□□□□ -1.5
RCL1Q9Y2P8 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC5.65□□□□□ -1.5
RCL1Q9Y2P8 APOC2-204ENST00000591597 447 ntTSL 5 BASIC5.65□□□□□ -1.5
RCL1Q9Y2P8 AL583859.2-202ENST00000602311 505 ntTSL 5 BASIC5.65□□□□□ -1.5
RCL1Q9Y2P8 AC018737.1-201ENST00000603900 204 ntBASIC5.65□□□□□ -1.5
RCL1Q9Y2P8 AL359704.2-201ENST00000604335 521 ntBASIC5.65□□□□□ -1.5
RCL1Q9Y2P8 OR6L2P-201ENST00000608207 925 ntBASIC5.65□□□□□ -1.5
RCL1Q9Y2P8 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5.65□□□□□ -1.5
RCL1Q9Y2P8 AC108704.1-201ENST00000611714 744 ntBASIC5.65□□□□□ -1.5
RCL1Q9Y2P8 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC5.65□□□□□ -1.5
RCL1Q9Y2P8 AL139254.2-202ENST00000641937 1156 ntBASIC5.65□□□□□ -1.5
RCL1Q9Y2P8 HCCAT5-202ENST00000642127 1029 ntBASIC5.65□□□□□ -1.5
RCL1Q9Y2P8 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RCL1Q9Y2P8 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
RCL1Q9Y2P8 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC5.65□□□□□ -1.51
RCL1Q9Y2P8 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
RCL1Q9Y2P8 AC021231.1-201ENST00000559246 1342 ntTSL 5 BASIC5.65□□□□□ -1.51
RCL1Q9Y2P8 C15orf41-214ENST00000569302 1325 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.51
RCL1Q9Y2P8 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
RCL1Q9Y2P8 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.65□□□□□ -1.51
RCL1Q9Y2P8 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
RCL1Q9Y2P8 AC011504.1-201ENST00000623331 4103 ntBASIC5.65□□□□□ -1.51
RCL1Q9Y2P8 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
RCL1Q9Y2P8 AL049634.1-201ENST00000453770 1720 ntBASIC5.65□□□□□ -1.51
RCL1Q9Y2P8 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC5.65□□□□□ -1.51
RCL1Q9Y2P8 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
RCL1Q9Y2P8 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.65□□□□□ -1.51
RCL1Q9Y2P8 AC093278.2-201ENST00000564956 2485 ntBASIC5.65□□□□□ -1.51
RCL1Q9Y2P8 AC125232.1-201ENST00000452554 1408 ntBASIC5.65□□□□□ -1.51
RCL1Q9Y2P8 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RCL1Q9Y2P8 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.65□□□□□ -1.51
RCL1Q9Y2P8 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
RCL1Q9Y2P8 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 AL162456.1-201ENST00000634535 2006 ntBASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 AL355377.1-201ENST00000621125 1653 ntBASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 RPL24P4-201ENST00000326586 421 ntBASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 RNA5SP65-201ENST00000363166 119 ntBASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 AL451142.1-201ENST00000375867 775 ntBASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 SNORA70.8-201ENST00000384231 136 ntBASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 IGHV1-24-201ENST00000390610 411 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 RN7SKP254-201ENST00000410685 310 ntBASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 RN7SKP188-201ENST00000410789 317 ntBASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 AL109935.1-201ENST00000413249 473 ntTSL 3 BASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 RTCA-AS1-201ENST00000421185 423 ntTSL 3 BASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 RPS29P5-201ENST00000452777 171 ntBASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 SNORA81.1-201ENST00000458922 177 ntBASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 AC114300.1-201ENST00000502347 280 ntBASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 OR7E163P-201ENST00000505943 894 ntBASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 LINC01944-201ENST00000517916 416 ntTSL 3 BASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 RN7SL376P-201ENST00000578594 264 ntBASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 ZNF528-AS1-204ENST00000601562 1069 ntTSL 5 BASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 AL137190.1-201ENST00000603288 282 ntBASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 AC008385.1-201ENST00000604421 355 ntBASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 AC114810.1-201ENST00000607415 473 ntBASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 AC026468.1-201ENST00000614981 107 ntBASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 AL731556.2-201ENST00000615610 770 ntBASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 AC073365.1-203ENST00000641055 1992 ntBASIC5.64□□□□□ -1.51
RCL1Q9Y2P8 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms