Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC8.32□□□□□ -1.08
CLIP2Q9UDT6 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
CLIP2Q9UDT6 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
CLIP2Q9UDT6 AC079178.2-201ENST00000439323 1624 ntBASIC8.32□□□□□ -1.08
CLIP2Q9UDT6 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC8.32□□□□□ -1.08
CLIP2Q9UDT6 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CLIP2Q9UDT6 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC8.31□□□□□ -1.08
CLIP2Q9UDT6 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CLIP2Q9UDT6 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CLIP2Q9UDT6 AC104581.5-201ENST00000624171 7141 ntBASIC8.31□□□□□ -1.08
CLIP2Q9UDT6 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
CLIP2Q9UDT6 AC241584.2-201ENST00000637142 2090 ntBASIC8.31□□□□□ -1.08
CLIP2Q9UDT6 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC8.31□□□□□ -1.08
CLIP2Q9UDT6 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC8.31□□□□□ -1.08
CLIP2Q9UDT6 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CLIP2Q9UDT6 AL031651.1-201ENST00000615357 1438 ntBASIC8.31□□□□□ -1.08
CLIP2Q9UDT6 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC8.31□□□□□ -1.08
CLIP2Q9UDT6 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CLIP2Q9UDT6 MIR1204-201ENST00000408388 67 ntBASIC8.31□□□□□ -1.08
CLIP2Q9UDT6 AC245047.1-201ENST00000433276 873 ntBASIC8.31□□□□□ -1.08
CLIP2Q9UDT6 CHCHD4P5-201ENST00000436684 427 ntBASIC8.31□□□□□ -1.08
CLIP2Q9UDT6 AL604028.2-201ENST00000437848 788 ntBASIC8.31□□□□□ -1.08
CLIP2Q9UDT6 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CLIP2Q9UDT6 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC8.31□□□□□ -1.08
CLIP2Q9UDT6 TFP1-201ENST00000460564 572 ntTSL 4 BASIC8.31□□□□□ -1.08
CLIP2Q9UDT6 RPSAP24-201ENST00000461543 873 ntBASIC8.31□□□□□ -1.08
CLIP2Q9UDT6 RN7SL797P-201ENST00000486314 297 ntBASIC8.31□□□□□ -1.08
CLIP2Q9UDT6 TFP1-203ENST00000490470 561 ntTSL 4 BASIC8.31□□□□□ -1.08
CLIP2Q9UDT6 PFN2-213ENST00000494827 793 ntTSL 4 BASIC8.31□□□□□ -1.08
CLIP2Q9UDT6 AC027801.3-201ENST00000515049 698 ntBASIC8.31□□□□□ -1.08
CLIP2Q9UDT6 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC8.31□□□□□ -1.08
CLIP2Q9UDT6 AC069240.2-201ENST00000550242 609 ntBASIC8.31□□□□□ -1.08
CLIP2Q9UDT6 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC8.31□□□□□ -1.08
CLIP2Q9UDT6 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC8.31□□□□□ -1.08
CLIP2Q9UDT6 EIF4A3P1-201ENST00000578499 647 ntBASIC8.31□□□□□ -1.08
CLIP2Q9UDT6 RN7SL126P-201ENST00000616400 299 ntBASIC8.31□□□□□ -1.08
CLIP2Q9UDT6 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
CLIP2Q9UDT6 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC8.31□□□□□ -1.08
CLIP2Q9UDT6 AC097634.1-201ENST00000604491 2467 ntBASIC8.31□□□□□ -1.08
CLIP2Q9UDT6 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC8.31□□□□□ -1.08
CLIP2Q9UDT6 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CLIP2Q9UDT6 KARSP2-201ENST00000415696 1639 ntBASIC8.31□□□□□ -1.08
CLIP2Q9UDT6 AC090771.1-201ENST00000585803 1618 ntBASIC8.31□□□□□ -1.08
CLIP2Q9UDT6 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
CLIP2Q9UDT6 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CLIP2Q9UDT6 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CLIP2Q9UDT6 UG0898H09-202ENST00000623646 7040 ntBASIC8.31□□□□□ -1.08
CLIP2Q9UDT6 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CLIP2Q9UDT6 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CLIP2Q9UDT6 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
CLIP2Q9UDT6 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
CLIP2Q9UDT6 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CLIP2Q9UDT6 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CLIP2Q9UDT6 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
CLIP2Q9UDT6 MAPK10-383ENST00000642032 3390 ntBASIC8.3□□□□□ -1.08
CLIP2Q9UDT6 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC8.3□□□□□ -1.08
CLIP2Q9UDT6 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CLIP2Q9UDT6 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC8.3□□□□□ -1.08
CLIP2Q9UDT6 HSPD1P1-201ENST00000503199 1726 ntBASIC8.3□□□□□ -1.08
CLIP2Q9UDT6 MIR99A-201ENST00000384906 81 ntBASIC8.3□□□□□ -1.08
CLIP2Q9UDT6 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CLIP2Q9UDT6 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC8.3□□□□□ -1.08
CLIP2Q9UDT6 AC091492.1-201ENST00000419844 272 ntBASIC8.3□□□□□ -1.08
CLIP2Q9UDT6 UQCRHP1-204ENST00000424609 274 ntBASIC8.3□□□□□ -1.08
CLIP2Q9UDT6 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC8.3□□□□□ -1.08
CLIP2Q9UDT6 SNRPEP5-201ENST00000425442 278 ntBASIC8.3□□□□□ -1.08
CLIP2Q9UDT6 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC8.3□□□□□ -1.08
CLIP2Q9UDT6 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC8.3□□□□□ -1.08
CLIP2Q9UDT6 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC8.3□□□□□ -1.08
CLIP2Q9UDT6 AC009518.3-201ENST00000438972 253 ntBASIC8.3□□□□□ -1.08
CLIP2Q9UDT6 AC114755.4-201ENST00000439114 443 ntBASIC8.3□□□□□ -1.08
CLIP2Q9UDT6 BX323845.2-201ENST00000458382 234 ntBASIC8.3□□□□□ -1.08
CLIP2Q9UDT6 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC8.3□□□□□ -1.08
CLIP2Q9UDT6 AC146944.3-201ENST00000509969 371 ntBASIC8.3□□□□□ -1.08
CLIP2Q9UDT6 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC8.3□□□□□ -1.08
CLIP2Q9UDT6 SCARNA6-201ENST00000515982 265 ntBASIC8.3□□□□□ -1.08
CLIP2Q9UDT6 CBLN2-203ENST00000581073 537 ntTSL 4 BASIC8.3□□□□□ -1.08
CLIP2Q9UDT6 LINC00906-202ENST00000587998 648 ntTSL 3 BASIC8.3□□□□□ -1.08
CLIP2Q9UDT6 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC8.3□□□□□ -1.08
CLIP2Q9UDT6 RPS27AP19-201ENST00000597285 458 ntBASIC8.3□□□□□ -1.08
CLIP2Q9UDT6 AC104184.1-201ENST00000607513 721 ntBASIC8.3□□□□□ -1.08
CLIP2Q9UDT6 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
CLIP2Q9UDT6 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CLIP2Q9UDT6 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CLIP2Q9UDT6 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CLIP2Q9UDT6 ALDH1A1-201ENST00000297785 2107 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CLIP2Q9UDT6 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CLIP2Q9UDT6 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CLIP2Q9UDT6 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC8.3□□□□□ -1.08
CLIP2Q9UDT6 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CLIP2Q9UDT6 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC8.3□□□□□ -1.08
CLIP2Q9UDT6 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
CLIP2Q9UDT6 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CLIP2Q9UDT6 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CLIP2Q9UDT6 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
CLIP2Q9UDT6 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC8.29□□□□□ -1.08
CLIP2Q9UDT6 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CLIP2Q9UDT6 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CLIP2Q9UDT6 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC8.29□□□□□ -1.08
CLIP2Q9UDT6 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms