Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 OR2G2-201ENST00000320065 954 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
LRCH3Q96II8 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
LRCH3Q96II8 MIR548XHG-201ENST00000355189 673 ntTSL 3 BASIC9.36□□□□□ -0.91
LRCH3Q96II8 SNORD56.4-201ENST00000363883 71 ntBASIC9.36□□□□□ -0.91
LRCH3Q96II8 RN7SKP226-201ENST00000364912 300 ntBASIC9.36□□□□□ -0.91
LRCH3Q96II8 COX6B1-202ENST00000392201 435 ntAPPRIS P1 TSL 3 BASIC9.36□□□□□ -0.91
LRCH3Q96II8 ATF1P1-201ENST00000406040 927 ntBASIC9.36□□□□□ -0.91
LRCH3Q96II8 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
LRCH3Q96II8 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
LRCH3Q96II8 OR4A8-201ENST00000418689 945 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
LRCH3Q96II8 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC9.36□□□□□ -0.91
LRCH3Q96II8 SDCBPP3-201ENST00000419629 891 ntBASIC9.36□□□□□ -0.91
LRCH3Q96II8 RPS10P2-201ENST00000430953 494 ntBASIC9.36□□□□□ -0.91
LRCH3Q96II8 TCEA1P3-201ENST00000443005 880 ntBASIC9.36□□□□□ -0.91
LRCH3Q96II8 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
LRCH3Q96II8 RPL36AP33-201ENST00000450395 310 ntBASIC9.36□□□□□ -0.91
LRCH3Q96II8 RPL5P13-201ENST00000462840 709 ntBASIC9.36□□□□□ -0.91
LRCH3Q96II8 RN7SL218P-201ENST00000464637 299 ntBASIC9.36□□□□□ -0.91
LRCH3Q96II8 RN7SL740P-201ENST00000467060 344 ntBASIC9.36□□□□□ -0.91
LRCH3Q96II8 HMGN1P12-201ENST00000499125 195 ntBASIC9.36□□□□□ -0.91
LRCH3Q96II8 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC9.36□□□□□ -0.91
LRCH3Q96II8 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
LRCH3Q96II8 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC9.36□□□□□ -0.91
LRCH3Q96II8 IGLC5-201ENST00000519670 293 ntBASIC9.36□□□□□ -0.91
LRCH3Q96II8 AL160314.2-202ENST00000553792 534 ntTSL 5 BASIC9.36□□□□□ -0.91
LRCH3Q96II8 AL355076.3-201ENST00000555838 587 ntBASIC9.36□□□□□ -0.91
LRCH3Q96II8 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
LRCH3Q96II8 AC126335.1-201ENST00000568414 510 ntTSL 2 BASIC9.36□□□□□ -0.91
LRCH3Q96II8 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC9.36□□□□□ -0.91
LRCH3Q96II8 AC010928.3-201ENST00000587712 541 ntBASIC9.36□□□□□ -0.91
LRCH3Q96II8 DTNA-220ENST00000590831 847 ntTSL 2 BASIC9.36□□□□□ -0.91
LRCH3Q96II8 LINC01483-205ENST00000591334 620 ntTSL 4 BASIC9.36□□□□□ -0.91
LRCH3Q96II8 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC9.36□□□□□ -0.91
LRCH3Q96II8 AL583859.2-202ENST00000602311 505 ntTSL 5 BASIC9.36□□□□□ -0.91
LRCH3Q96II8 AC108861.1-201ENST00000611634 585 ntTSL 4 BASIC9.36□□□□□ -0.91
LRCH3Q96II8 AC026951.2-201ENST00000613847 241 ntBASIC9.36□□□□□ -0.91
LRCH3Q96II8 CD200R1L-205ENST00000617549 762 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
LRCH3Q96II8 ST13-207ENST00000620312 944 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
LRCH3Q96II8 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC9.36□□□□□ -0.91
LRCH3Q96II8 AC027506.1-201ENST00000621395 198 ntBASIC9.36□□□□□ -0.91
LRCH3Q96II8 AC106782.7-201ENST00000624024 418 ntBASIC9.36□□□□□ -0.91
LRCH3Q96II8 AC133555.5-201ENST00000624430 418 ntBASIC9.36□□□□□ -0.91
LRCH3Q96II8 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
LRCH3Q96II8 ABBA01040607.1-201ENST00000640749 321 ntBASIC9.36□□□□□ -0.91
LRCH3Q96II8 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC9.36□□□□□ -0.91
LRCH3Q96II8 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
LRCH3Q96II8 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
LRCH3Q96II8 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC9.36□□□□□ -0.91
LRCH3Q96II8 EPS15P1-202ENST00000459691 2071 ntBASIC9.36□□□□□ -0.91
LRCH3Q96II8 LINC01588-217ENST00000635379 1595 ntTSL 5 BASIC9.36□□□□□ -0.91
LRCH3Q96II8 LUC7L3-208ENST00000505658 7040 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
LRCH3Q96II8 NRXN1-212ENST00000412315 2215 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
LRCH3Q96II8 HSPD1P11-201ENST00000508643 1702 ntBASIC9.36□□□□□ -0.91
LRCH3Q96II8 SIRPB1-213ENST00000568365 1701 ntAPPRIS ALT2 TSL 2 BASIC9.36□□□□□ -0.91
LRCH3Q96II8 CRYZ-201ENST00000340866 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
LRCH3Q96II8 STRADA-226ENST00000638276 1865 ntTSL 5 BASIC9.36□□□□□ -0.91
LRCH3Q96II8 CTNNA1-243ENST00000540387 2684 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
LRCH3Q96II8 ERC1-225ENST00000611180 2832 ntTSL 5 BASIC9.36□□□□□ -0.91
LRCH3Q96II8 SLC38A4-202ENST00000447411 3791 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
LRCH3Q96II8 FP325330.3-201ENST00000623760 9537 ntBASIC9.36□□□□□ -0.91
LRCH3Q96II8 MTND5P11-201ENST00000511037 1812 ntBASIC9.35□□□□□ -0.91
LRCH3Q96II8 MAGEB4-201ENST00000378982 2142 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
LRCH3Q96II8 EIF5A2-201ENST00000295822 5593 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LRCH3Q96II8 AC092645.1-201ENST00000624058 2272 ntBASIC9.35□□□□□ -0.91
LRCH3Q96II8 MSS51-201ENST00000299432 2421 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LRCH3Q96II8 POLD3-201ENST00000263681 3821 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LRCH3Q96II8 CD300LD-201ENST00000375352 1303 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LRCH3Q96II8 SUN1-203ENST00000401592 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
LRCH3Q96II8 CSNK1G1-201ENST00000303052 8179 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
LRCH3Q96II8 ELP2-205ENST00000442325 2722 ntTSL 2 BASIC9.35□□□□□ -0.91
LRCH3Q96II8 PDPN-212ENST00000621990 2738 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
LRCH3Q96II8 SPIN4-201ENST00000374884 4117 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
LRCH3Q96II8 XIRP2-205ENST00000409605 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
LRCH3Q96II8 AL049543.1-201ENST00000499525 2874 ntTSL 2 BASIC9.35□□□□□ -0.91
LRCH3Q96II8 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
LRCH3Q96II8 AP002001.2-201ENST00000529025 1469 ntBASIC9.35□□□□□ -0.91
LRCH3Q96II8 STXBP5L-208ENST00000497029 3036 ntTSL 5 BASIC9.35□□□□□ -0.91
LRCH3Q96II8 KLRC1-207ENST00000544822 1600 ntAPPRIS P4 TSL 1 (best) BASIC9.35□□□□□ -0.91
LRCH3Q96II8 CCR3-208ENST00000545097 1786 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
LRCH3Q96II8 VLDLR-203ENST00000382100 9163 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
LRCH3Q96II8 WDR20-206ENST00000454394 2067 ntTSL 2 BASIC9.35□□□□□ -0.91
LRCH3Q96II8 NEK6-204ENST00000373603 3447 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LRCH3Q96II8 ZNF2-202ENST00000611463 3737 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
LRCH3Q96II8 CERS3-201ENST00000284382 3894 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LRCH3Q96II8 SORBS2-209ENST00000418609 5529 ntTSL 2 BASIC9.35□□□□□ -0.91
LRCH3Q96II8 OR10J6P-201ENST00000289731 930 ntBASIC9.35□□□□□ -0.91
LRCH3Q96II8 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
LRCH3Q96II8 MED12-201ENST00000333646 6977 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
LRCH3Q96II8 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
LRCH3Q96II8 UBXN8-202ENST00000341403 1202 ntTSL 3 BASIC9.35□□□□□ -0.91
LRCH3Q96II8 AC093392.1-201ENST00000366280 340 ntBASIC9.35□□□□□ -0.91
LRCH3Q96II8 CASP8-208ENST00000392266 1283 ntTSL 2 BASIC9.35□□□□□ -0.91
LRCH3Q96II8 FAM218BP-201ENST00000408897 458 ntBASIC9.35□□□□□ -0.91
LRCH3Q96II8 RPL21P108-201ENST00000413857 481 ntBASIC9.35□□□□□ -0.91
LRCH3Q96II8 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC9.35□□□□□ -0.91
LRCH3Q96II8 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
LRCH3Q96II8 MAPK6PS6-201ENST00000420752 1053 ntBASIC9.35□□□□□ -0.91
LRCH3Q96II8 LINC02028-201ENST00000420947 528 ntTSL 3 BASIC9.35□□□□□ -0.91
LRCH3Q96II8 Z93930.2-205ENST00000422972 409 ntTSL 2 BASIC9.35□□□□□ -0.91
LRCH3Q96II8 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms