Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC015871.3-201ENST00000618835 2261 ntBASIC6.43□□□□□ -1.38
C9orf40Q8IXQ3 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
C9orf40Q8IXQ3 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
C9orf40Q8IXQ3 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
C9orf40Q8IXQ3 AC104837.1-201ENST00000444644 1587 ntBASIC6.43□□□□□ -1.38
C9orf40Q8IXQ3 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC6.43□□□□□ -1.38
C9orf40Q8IXQ3 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
C9orf40Q8IXQ3 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
C9orf40Q8IXQ3 AC104162.1-201ENST00000430831 2382 ntBASIC6.43□□□□□ -1.38
C9orf40Q8IXQ3 TRIM53CP-201ENST00000531490 1354 ntBASIC6.43□□□□□ -1.38
C9orf40Q8IXQ3 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
C9orf40Q8IXQ3 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC6.43□□□□□ -1.38
C9orf40Q8IXQ3 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
C9orf40Q8IXQ3 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC6.42□□□□□ -1.38
C9orf40Q8IXQ3 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC6.42□□□□□ -1.38
C9orf40Q8IXQ3 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
C9orf40Q8IXQ3 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
C9orf40Q8IXQ3 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
C9orf40Q8IXQ3 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
C9orf40Q8IXQ3 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC6.42□□□□□ -1.38
C9orf40Q8IXQ3 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
C9orf40Q8IXQ3 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
C9orf40Q8IXQ3 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
C9orf40Q8IXQ3 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
C9orf40Q8IXQ3 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC6.42□□□□□ -1.38
C9orf40Q8IXQ3 GMFG-201ENST00000253054 616 ntTSL 5 BASIC6.42□□□□□ -1.38
C9orf40Q8IXQ3 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
C9orf40Q8IXQ3 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
C9orf40Q8IXQ3 RN7SKP47-201ENST00000365347 328 ntBASIC6.42□□□□□ -1.38
C9orf40Q8IXQ3 ERMN-202ENST00000409216 746 ntTSL 4 BASIC6.42□□□□□ -1.38
C9orf40Q8IXQ3 OR52N3P-201ENST00000413417 934 ntBASIC6.42□□□□□ -1.38
C9orf40Q8IXQ3 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.42□□□□□ -1.38
C9orf40Q8IXQ3 RPL18AP14-201ENST00000417685 526 ntBASIC6.42□□□□□ -1.38
C9orf40Q8IXQ3 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC6.42□□□□□ -1.38
C9orf40Q8IXQ3 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC6.42□□□□□ -1.38
C9orf40Q8IXQ3 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.42□□□□□ -1.38
C9orf40Q8IXQ3 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC6.42□□□□□ -1.38
C9orf40Q8IXQ3 AC021074.2-201ENST00000468434 172 ntBASIC6.42□□□□□ -1.38
C9orf40Q8IXQ3 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC6.42□□□□□ -1.38
C9orf40Q8IXQ3 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC6.42□□□□□ -1.38
C9orf40Q8IXQ3 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
C9orf40Q8IXQ3 LINC00964-204ENST00000528090 572 ntTSL 4 BASIC6.42□□□□□ -1.38
C9orf40Q8IXQ3 FCF1-203ENST00000553615 954 ntTSL 3 BASIC6.42□□□□□ -1.38
C9orf40Q8IXQ3 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
C9orf40Q8IXQ3 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC6.42□□□□□ -1.38
C9orf40Q8IXQ3 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC6.42□□□□□ -1.38
C9orf40Q8IXQ3 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC6.42□□□□□ -1.38
C9orf40Q8IXQ3 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC6.42□□□□□ -1.38
C9orf40Q8IXQ3 PTCHD3P1-201ENST00000612350 537 ntBASIC6.42□□□□□ -1.38
C9orf40Q8IXQ3 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC6.42□□□□□ -1.38
C9orf40Q8IXQ3 AL589935.2-201ENST00000616471 1231 ntBASIC6.42□□□□□ -1.38
C9orf40Q8IXQ3 TEX41-279ENST00000629149 609 ntTSL 5 BASIC6.42□□□□□ -1.38
C9orf40Q8IXQ3 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC6.42□□□□□ -1.38
C9orf40Q8IXQ3 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
C9orf40Q8IXQ3 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
C9orf40Q8IXQ3 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC6.42□□□□□ -1.38
C9orf40Q8IXQ3 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC6.42□□□□□ -1.38
C9orf40Q8IXQ3 MAPK10-379ENST00000642013 1385 ntBASIC6.42□□□□□ -1.38
C9orf40Q8IXQ3 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
C9orf40Q8IXQ3 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC6.42□□□□□ -1.38
C9orf40Q8IXQ3 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
C9orf40Q8IXQ3 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
C9orf40Q8IXQ3 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC6.42□□□□□ -1.38
C9orf40Q8IXQ3 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
C9orf40Q8IXQ3 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
C9orf40Q8IXQ3 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
C9orf40Q8IXQ3 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
C9orf40Q8IXQ3 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC6.41□□□□□ -1.38
C9orf40Q8IXQ3 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC6.41□□□□□ -1.38
C9orf40Q8IXQ3 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC6.41□□□□□ -1.38
C9orf40Q8IXQ3 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
C9orf40Q8IXQ3 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC6.41□□□□□ -1.38
C9orf40Q8IXQ3 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
C9orf40Q8IXQ3 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
C9orf40Q8IXQ3 AP000866.6-201ENST00000638898 3579 ntBASIC6.41□□□□□ -1.38
C9orf40Q8IXQ3 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
C9orf40Q8IXQ3 MIR199B-201ENST00000384849 110 ntBASIC6.41□□□□□ -1.38
C9orf40Q8IXQ3 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
C9orf40Q8IXQ3 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC6.41□□□□□ -1.38
C9orf40Q8IXQ3 MORF4L1P5-201ENST00000433352 961 ntBASIC6.41□□□□□ -1.38
C9orf40Q8IXQ3 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
C9orf40Q8IXQ3 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC6.41□□□□□ -1.38
C9orf40Q8IXQ3 LINC01638-202ENST00000444114 637 ntTSL 2 BASIC6.41□□□□□ -1.38
C9orf40Q8IXQ3 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC6.41□□□□□ -1.38
C9orf40Q8IXQ3 RN7SL492P-201ENST00000460700 295 ntBASIC6.41□□□□□ -1.38
C9orf40Q8IXQ3 AC017007.3-201ENST00000479865 435 ntBASIC6.41□□□□□ -1.38
C9orf40Q8IXQ3 AL079303.1-201ENST00000486611 463 ntBASIC6.41□□□□□ -1.38
C9orf40Q8IXQ3 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC6.41□□□□□ -1.38
C9orf40Q8IXQ3 RN7SL143P-201ENST00000496780 297 ntBASIC6.41□□□□□ -1.38
C9orf40Q8IXQ3 AK6-204ENST00000512561 587 ntTSL 5 BASIC6.41□□□□□ -1.38
C9orf40Q8IXQ3 MTCYBP44-201ENST00000514835 823 ntBASIC6.41□□□□□ -1.38
C9orf40Q8IXQ3 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
C9orf40Q8IXQ3 SCARNA11.1-201ENST00000516918 132 ntBASIC6.41□□□□□ -1.38
C9orf40Q8IXQ3 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC6.41□□□□□ -1.38
C9orf40Q8IXQ3 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC6.41□□□□□ -1.38
C9orf40Q8IXQ3 PPIAP6-201ENST00000557078 499 ntBASIC6.41□□□□□ -1.38
C9orf40Q8IXQ3 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC6.41□□□□□ -1.38
C9orf40Q8IXQ3 AC007255.2-201ENST00000604053 631 ntBASIC6.41□□□□□ -1.38
C9orf40Q8IXQ3 AC116165.3-201ENST00000614524 400 ntBASIC6.41□□□□□ -1.38
C9orf40Q8IXQ3 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms