Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
ATG4DQ86TL0 PFDN5-211ENST00000550846 392 ntTSL 2 BASIC7.18□□□□□ -1.26
ATG4DQ86TL0 PFDN5-214ENST00000551018 847 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
ATG4DQ86TL0 KRT73-AS1-203ENST00000552364 3808 ntTSL 2 BASIC7.18□□□□□ -1.26
ATG4DQ86TL0 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC7.18□□□□□ -1.26
ATG4DQ86TL0 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC7.18□□□□□ -1.26
ATG4DQ86TL0 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC7.18□□□□□ -1.26
ATG4DQ86TL0 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC7.18□□□□□ -1.26
ATG4DQ86TL0 AL118558.1-201ENST00000557551 566 ntTSL 3 BASIC7.18□□□□□ -1.26
ATG4DQ86TL0 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
ATG4DQ86TL0 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC7.18□□□□□ -1.26
ATG4DQ86TL0 AC098850.2-201ENST00000578710 686 ntTSL 5 BASIC7.18□□□□□ -1.26
ATG4DQ86TL0 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC7.18□□□□□ -1.26
ATG4DQ86TL0 AP000811.1-201ENST00000603803 651 ntBASIC7.18□□□□□ -1.26
ATG4DQ86TL0 AC010857.1-201ENST00000606398 594 ntBASIC7.18□□□□□ -1.26
ATG4DQ86TL0 AC087623.4-201ENST00000606593 695 ntBASIC7.18□□□□□ -1.26
ATG4DQ86TL0 AC007038.2-201ENST00000608095 740 ntBASIC7.18□□□□□ -1.26
ATG4DQ86TL0 AC016394.1-201ENST00000608444 833 ntBASIC7.18□□□□□ -1.26
ATG4DQ86TL0 CACNB2-213ENST00000612134 3825 ntTSL 5 BASIC7.18□□□□□ -1.26
ATG4DQ86TL0 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC7.18□□□□□ -1.26
ATG4DQ86TL0 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC7.18□□□□□ -1.26
ATG4DQ86TL0 AC127071.1-201ENST00000624997 712 ntBASIC7.18□□□□□ -1.26
ATG4DQ86TL0 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC7.18□□□□□ -1.26
ATG4DQ86TL0 OR11H2-202ENST00000641517 1085 ntBASIC7.18□□□□□ -1.26
ATG4DQ86TL0 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
ATG4DQ86TL0 TPD52-213ENST00000520527 2638 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
ATG4DQ86TL0 HSPD1P10-201ENST00000404829 1676 ntBASIC7.18□□□□□ -1.26
ATG4DQ86TL0 BTN3A3-201ENST00000244519 3002 ntAPPRIS P4 TSL 1 (best) BASIC7.18□□□□□ -1.26
ATG4DQ86TL0 TGIF1-223ENST00000618001 3030 ntTSL 2 BASIC7.18□□□□□ -1.26
ATG4DQ86TL0 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
ATG4DQ86TL0 SERPINB4-201ENST00000341074 1749 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
ATG4DQ86TL0 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
ATG4DQ86TL0 AC073324.1-201ENST00000425993 1435 ntBASIC7.18□□□□□ -1.26
ATG4DQ86TL0 P2RY14-201ENST00000309170 2513 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
ATG4DQ86TL0 CYP8B1-201ENST00000316161 3974 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
ATG4DQ86TL0 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
ATG4DQ86TL0 THSD4-AS1-202ENST00000562634 2182 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
ATG4DQ86TL0 AC105760.1-201ENST00000244820 2231 ntTSL 2 BASIC7.17□□□□□ -1.26
ATG4DQ86TL0 LINC01091-204ENST00000515769 2204 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
ATG4DQ86TL0 RIPOR2-205ENST00000510784 3381 ntTSL 2 BASIC7.17□□□□□ -1.26
ATG4DQ86TL0 FBXO30-201ENST00000237281 9009 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
ATG4DQ86TL0 EYA4-203ENST00000367895 5699 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
ATG4DQ86TL0 YAF2-201ENST00000327791 4156 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
ATG4DQ86TL0 AC079248.1-201ENST00000427568 1546 ntBASIC7.17□□□□□ -1.26
ATG4DQ86TL0 C1S-205ENST00000406697 3076 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
ATG4DQ86TL0 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
ATG4DQ86TL0 SLC2A14-215ENST00000542546 3120 ntTSL 5 BASIC7.17□□□□□ -1.26
ATG4DQ86TL0 AMPD1-201ENST00000369538 2392 ntAPPRIS ALT2 TSL 2 BASIC7.17□□□□□ -1.26
ATG4DQ86TL0 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
ATG4DQ86TL0 GPM6A-202ENST00000393658 2821 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
ATG4DQ86TL0 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
ATG4DQ86TL0 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
ATG4DQ86TL0 NUDT13-202ENST00000357321 2102 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
ATG4DQ86TL0 Y_RNA.3-201ENST00000362331 103 ntBASIC7.17□□□□□ -1.26
ATG4DQ86TL0 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
ATG4DQ86TL0 IGHV4-59-201ENST00000390629 495 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
ATG4DQ86TL0 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC7.17□□□□□ -1.26
ATG4DQ86TL0 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
ATG4DQ86TL0 SLC2A11-205ENST00000403208 564 ntTSL 4 BASIC7.17□□□□□ -1.26
ATG4DQ86TL0 AL021407.1-201ENST00000404531 386 ntBASIC7.17□□□□□ -1.26
ATG4DQ86TL0 IGLC6-201ENST00000410078 317 ntBASIC7.17□□□□□ -1.26
ATG4DQ86TL0 RN7SKP119-201ENST00000410753 273 ntBASIC7.17□□□□□ -1.26
ATG4DQ86TL0 AC024937.2-201ENST00000411669 1242 ntBASIC7.17□□□□□ -1.26
ATG4DQ86TL0 HMGB1P49-201ENST00000418882 569 ntBASIC7.17□□□□□ -1.26
ATG4DQ86TL0 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC7.17□□□□□ -1.26
ATG4DQ86TL0 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC7.17□□□□□ -1.26
ATG4DQ86TL0 MTND4P24-201ENST00000424002 397 ntBASIC7.17□□□□□ -1.26
ATG4DQ86TL0 TRGV7-201ENST00000427089 353 ntBASIC7.17□□□□□ -1.26
ATG4DQ86TL0 HMGA1P4-201ENST00000428643 334 ntTSL 2 BASIC7.17□□□□□ -1.26
ATG4DQ86TL0 AC124944.2-201ENST00000429866 1242 ntBASIC7.17□□□□□ -1.26
ATG4DQ86TL0 MTCO1P52-201ENST00000433928 531 ntBASIC7.17□□□□□ -1.26
ATG4DQ86TL0 AL008629.1-201ENST00000438615 184 ntBASIC7.17□□□□□ -1.26
ATG4DQ86TL0 AL513321.1-201ENST00000441175 761 ntBASIC7.17□□□□□ -1.26
ATG4DQ86TL0 RBM22P5-201ENST00000449536 1277 ntBASIC7.17□□□□□ -1.26
ATG4DQ86TL0 AC009961.3-201ENST00000449832 765 ntBASIC7.17□□□□□ -1.26
ATG4DQ86TL0 FGF12-206ENST00000450716 768 ntTSL 5 BASIC7.17□□□□□ -1.26
ATG4DQ86TL0 AL133232.1-201ENST00000458293 483 ntTSL 5 BASIC7.17□□□□□ -1.26
ATG4DQ86TL0 AL031864.2-201ENST00000498507 350 ntBASIC7.17□□□□□ -1.26
ATG4DQ86TL0 AC008638.2-201ENST00000503840 715 ntBASIC7.17□□□□□ -1.26
ATG4DQ86TL0 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC7.17□□□□□ -1.26
ATG4DQ86TL0 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC7.17□□□□□ -1.26
ATG4DQ86TL0 ASNSP4-201ENST00000511103 447 ntBASIC7.17□□□□□ -1.26
ATG4DQ86TL0 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC7.17□□□□□ -1.26
ATG4DQ86TL0 RNA5SP287-201ENST00000516358 103 ntBASIC7.17□□□□□ -1.26
ATG4DQ86TL0 RN7SKP2-201ENST00000517003 319 ntBASIC7.17□□□□□ -1.26
ATG4DQ86TL0 OR5G4P-201ENST00000525251 760 ntBASIC7.17□□□□□ -1.26
ATG4DQ86TL0 OR4A13P-201ENST00000529316 942 ntBASIC7.17□□□□□ -1.26
ATG4DQ86TL0 AC044839.1-209ENST00000529769 878 ntTSL 5 BASIC7.17□□□□□ -1.26
ATG4DQ86TL0 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC7.17□□□□□ -1.26
ATG4DQ86TL0 AEBP2-207ENST00000541908 975 ntAPPRIS ALT2 TSL 3 BASIC7.17□□□□□ -1.26
ATG4DQ86TL0 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC7.17□□□□□ -1.26
ATG4DQ86TL0 SERPINE4P-201ENST00000554978 281 ntBASIC7.17□□□□□ -1.26
ATG4DQ86TL0 SETP1-201ENST00000556014 845 ntBASIC7.17□□□□□ -1.26
ATG4DQ86TL0 AC007495.1-202ENST00000565155 559 ntTSL 2 BASIC7.17□□□□□ -1.26
ATG4DQ86TL0 AF131215.7-201ENST00000602443 707 ntBASIC7.17□□□□□ -1.26
ATG4DQ86TL0 QTRT1P1-201ENST00000604344 1078 ntBASIC7.17□□□□□ -1.26
ATG4DQ86TL0 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC7.17□□□□□ -1.26
ATG4DQ86TL0 AC016405.2-201ENST00000607393 312 ntBASIC7.17□□□□□ -1.26
ATG4DQ86TL0 AL731533.2-201ENST00000607898 578 ntBASIC7.17□□□□□ -1.26
ATG4DQ86TL0 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms