Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 LINC01260-201ENST00000415889 1416 ntTSL 5 BASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 MAGT1-205ENST00000618282 2788 ntAPPRIS ALT1 TSL 1 (best) BASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 THAP12P3-201ENST00000456373 2266 ntBASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 MRPS17P1-201ENST00000596009 3130 ntBASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 FGG-203ENST00000404648 1760 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 SSR2-201ENST00000295702 1116 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 VPREB1-201ENST00000302273 626 ntAPPRIS ALT2 TSL 3 BASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 TRAV6-201ENST00000390428 404 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 RN7SKP168-201ENST00000410910 300 ntBASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 PHBP7-201ENST00000415677 814 ntBASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 AL441943.3-201ENST00000418524 587 ntTSL 5 BASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 VDAC1P2-201ENST00000423609 850 ntBASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 PTP4A1P3-201ENST00000433661 420 ntBASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 AC022816.1-201ENST00000436469 804 ntTSL 5 BASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 CLUHP5-201ENST00000438421 774 ntBASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 MTCO1P19-201ENST00000443487 500 ntBASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 LINC01320-202ENST00000453774 1205 ntTSL 3 BASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 BUB3P1-201ENST00000458451 999 ntBASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 AC008379.1-201ENST00000463655 464 ntBASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 RN7SL370P-201ENST00000470869 295 ntBASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 RN7SL418P-201ENST00000473031 287 ntBASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 SYPL1P1-201ENST00000473622 768 ntBASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 RPS17P11-201ENST00000474297 293 ntBASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 AC108688.1-201ENST00000485817 713 ntBASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 IGKV1-39-201ENST00000498574 398 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 MTND5P5-201ENST00000503764 376 ntBASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 AC079795.1-201ENST00000508847 358 ntTSL 3 BASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 AC139713.1-202ENST00000512366 460 ntBASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 AC098827.1-201ENST00000514630 667 ntBASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 AC022447.1-201ENST00000515358 464 ntBASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 AC091175.1-201ENST00000522168 572 ntBASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 AC008619.1-201ENST00000524312 567 ntTSL 4 BASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 DACT3-AS1-202ENST00000525008 496 ntTSL 2 BASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 CRYAB-203ENST00000525823 915 ntTSL 2 BASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 AP006587.2-201ENST00000530696 493 ntBASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 AC099687.1-201ENST00000531798 510 ntTSL 3 BASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 CRYAB-212ENST00000533280 545 ntTSL 2 BASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 AC004217.3-201ENST00000551552 878 ntBASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 RPS3AP4-201ENST00000555161 764 ntBASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 ZNF519P3-201ENST00000557158 1032 ntBASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 AC087639.1-201ENST00000560974 920 ntBASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 CYB5B-205ENST00000561792 823 ntTSL 5 BASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 FCGR1CP-201ENST00000579737 1127 ntBASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 VN1R83P-201ENST00000595685 445 ntBASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 BNIP3P33-201ENST00000598912 569 ntBASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 AC133552.5-201ENST00000604266 540 ntBASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 uc_338.2-201ENST00000612963 182 ntBASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 AC007204.2-201ENST00000615022 616 ntBASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 AC025016.1-201ENST00000616746 682 ntBASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 KCNQ1OT1_2.1-201ENST00000619507 196 ntBASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 RBM12B-AS1-201ENST00000623283 653 ntBASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 AC007490.1-201ENST00000624321 703 ntBASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 AL356121.2-201ENST00000624715 780 ntBASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 RAB5B-210ENST00000553116 3322 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 ALB-220ENST00000621628 1606 ntTSL 5 BASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 TCP1P3-201ENST00000414406 1498 ntBASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 ZNF182-202ENST00000396965 3586 ntAPPRIS P4 TSL 2 BASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 HIPK1-208ENST00000426820 4112 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 AL034417.4-202ENST00000642135 2236 ntBASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 FMO9P-202ENST00000488458 1535 ntBASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 EXOSC9-211ENST00000512454 1543 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 AC015871.4-201ENST00000624650 2260 ntBASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 ZNF19-210ENST00000567225 2838 ntTSL 3 BASIC8.48□□□□□ -1.05
FOXR1Q6PIV2 COL21A1-212ENST00000535941 3369 ntAPPRIS ALT1 TSL 5 BASIC8.48□□□□□ -1.05
FOXR1Q6PIV2 RGS2-201ENST00000235382 1354 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
FOXR1Q6PIV2 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC8.48□□□□□ -1.05
FOXR1Q6PIV2 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
FOXR1Q6PIV2 INO80C-212ENST00000592173 3245 ntTSL 2 BASIC8.48□□□□□ -1.05
FOXR1Q6PIV2 MEP1B-204ENST00000581447 2308 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
FOXR1Q6PIV2 NUP155-201ENST00000231498 8143 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
FOXR1Q6PIV2 PTBP3-205ENST00000374257 7240 ntAPPRIS ALT1 TSL 2 BASIC8.48□□□□□ -1.05
FOXR1Q6PIV2 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC8.48□□□□□ -1.05
FOXR1Q6PIV2 TCL6-207ENST00000483087 2194 ntTSL 2 BASIC8.48□□□□□ -1.05
FOXR1Q6PIV2 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
FOXR1Q6PIV2 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
FOXR1Q6PIV2 NAALAD2-204ENST00000525171 1613 ntTSL 2 BASIC8.48□□□□□ -1.05
FOXR1Q6PIV2 SLC13A3-202ENST00000290317 3994 ntTSL 5 BASIC8.48□□□□□ -1.05
FOXR1Q6PIV2 MR1-205ENST00000434571 7479 ntTSL 5 BASIC8.48□□□□□ -1.05
FOXR1Q6PIV2 DPH6-202ENST00000440392 3648 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
FOXR1Q6PIV2 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
FOXR1Q6PIV2 IGLV2-14-201ENST00000390312 402 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
FOXR1Q6PIV2 FCAR-206ENST00000391724 762 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
FOXR1Q6PIV2 AL390774.1-201ENST00000411924 246 ntBASIC8.48□□□□□ -1.05
FOXR1Q6PIV2 UBE2V1P9-201ENST00000414760 368 ntBASIC8.48□□□□□ -1.05
FOXR1Q6PIV2 C2orf74-202ENST00000426997 879 ntAPPRIS P2 TSL 3 BASIC8.48□□□□□ -1.05
FOXR1Q6PIV2 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC8.48□□□□□ -1.05
FOXR1Q6PIV2 AC244102.1-201ENST00000437309 848 ntTSL 3 BASIC8.48□□□□□ -1.05
FOXR1Q6PIV2 PRSS37-203ENST00000438520 826 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms