Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
SYCNQ0VAF6 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC4.67□□□□□ -1.66
SYCNQ0VAF6 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC4.67□□□□□ -1.66
SYCNQ0VAF6 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
SYCNQ0VAF6 RNA5SP472-201ENST00000363868 119 ntBASIC4.67□□□□□ -1.66
SYCNQ0VAF6 HNRNPH1P2-201ENST00000396845 1210 ntBASIC4.67□□□□□ -1.66
SYCNQ0VAF6 ERMN-202ENST00000409216 746 ntTSL 4 BASIC4.67□□□□□ -1.66
SYCNQ0VAF6 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC4.67□□□□□ -1.66
SYCNQ0VAF6 AC023141.1-201ENST00000419418 379 ntBASIC4.67□□□□□ -1.66
SYCNQ0VAF6 AL627308.2-201ENST00000420014 432 ntBASIC4.67□□□□□ -1.66
SYCNQ0VAF6 OR5P4P-201ENST00000424698 917 ntBASIC4.67□□□□□ -1.66
SYCNQ0VAF6 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC4.67□□□□□ -1.66
SYCNQ0VAF6 AF274573.1-201ENST00000430535 494 ntBASIC4.67□□□□□ -1.66
SYCNQ0VAF6 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC4.67□□□□□ -1.66
SYCNQ0VAF6 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SYCNQ0VAF6 SDHCP3-201ENST00000445371 506 ntBASIC4.67□□□□□ -1.66
SYCNQ0VAF6 CEACAMP5-201ENST00000448037 961 ntBASIC4.67□□□□□ -1.66
SYCNQ0VAF6 RBMY3AP-201ENST00000449381 1145 ntBASIC4.67□□□□□ -1.66
SYCNQ0VAF6 AC004692.1-201ENST00000455430 424 ntBASIC4.67□□□□□ -1.66
SYCNQ0VAF6 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC4.67□□□□□ -1.66
SYCNQ0VAF6 RN7SL160P-201ENST00000468558 284 ntBASIC4.67□□□□□ -1.66
SYCNQ0VAF6 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC4.67□□□□□ -1.66
SYCNQ0VAF6 RN7SL182P-201ENST00000496499 300 ntBASIC4.67□□□□□ -1.66
SYCNQ0VAF6 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC4.67□□□□□ -1.66
SYCNQ0VAF6 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SYCNQ0VAF6 AC027315.1-201ENST00000511592 469 ntTSL 3 BASIC4.67□□□□□ -1.66
SYCNQ0VAF6 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC4.67□□□□□ -1.66
SYCNQ0VAF6 OR7E154P-201ENST00000525174 932 ntBASIC4.67□□□□□ -1.66
SYCNQ0VAF6 LINC00964-204ENST00000528090 572 ntTSL 4 BASIC4.67□□□□□ -1.66
SYCNQ0VAF6 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC4.67□□□□□ -1.66
SYCNQ0VAF6 KLRD1-210ENST00000543777 789 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
SYCNQ0VAF6 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
SYCNQ0VAF6 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SYCNQ0VAF6 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC4.67□□□□□ -1.66
SYCNQ0VAF6 MIR5705-201ENST00000579870 89 ntBASIC4.67□□□□□ -1.66
SYCNQ0VAF6 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC4.67□□□□□ -1.66
SYCNQ0VAF6 AP001554.1-201ENST00000604533 376 ntBASIC4.67□□□□□ -1.66
SYCNQ0VAF6 AL139041.1-201ENST00000605480 610 ntBASIC4.67□□□□□ -1.66
SYCNQ0VAF6 IL13-206ENST00000617259 498 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
SYCNQ0VAF6 EAPP-205ENST00000618169 1237 ntTSL 5 BASIC4.67□□□□□ -1.66
SYCNQ0VAF6 AL355480.4-201ENST00000626823 69 ntBASIC4.67□□□□□ -1.66
SYCNQ0VAF6 OR5AU1-204ENST00000641822 1197 ntBASIC4.67□□□□□ -1.66
SYCNQ0VAF6 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
SYCNQ0VAF6 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SYCNQ0VAF6 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SYCNQ0VAF6 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SYCNQ0VAF6 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SYCNQ0VAF6 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SYCNQ0VAF6 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
SYCNQ0VAF6 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SYCNQ0VAF6 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC4.67□□□□□ -1.66
SYCNQ0VAF6 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SYCNQ0VAF6 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SYCNQ0VAF6 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SYCNQ0VAF6 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC4.67□□□□□ -1.66
SYCNQ0VAF6 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC4.67□□□□□ -1.66
SYCNQ0VAF6 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SYCNQ0VAF6 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC4.67□□□□□ -1.66
SYCNQ0VAF6 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SYCNQ0VAF6 AL358913.2-201ENST00000553881 1548 ntBASIC4.67□□□□□ -1.66
SYCNQ0VAF6 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SYCNQ0VAF6 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SYCNQ0VAF6 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
SYCNQ0VAF6 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SYCNQ0VAF6 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SYCNQ0VAF6 TBC1D19-205ENST00000511789 1386 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SYCNQ0VAF6 AL390726.6-202ENST00000635962 1365 ntTSL 5 BASIC4.66□□□□□ -1.66
SYCNQ0VAF6 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC4.66□□□□□ -1.66
SYCNQ0VAF6 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC4.66□□□□□ -1.66
SYCNQ0VAF6 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC4.66□□□□□ -1.66
SYCNQ0VAF6 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC4.66□□□□□ -1.66
SYCNQ0VAF6 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
SYCNQ0VAF6 OFD1P17-201ENST00000437639 3018 ntBASIC4.66□□□□□ -1.66
SYCNQ0VAF6 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
SYCNQ0VAF6 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC4.66□□□□□ -1.66
SYCNQ0VAF6 RPL10P16-201ENST00000325000 645 ntBASIC4.66□□□□□ -1.66
SYCNQ0VAF6 SNORA30B-201ENST00000365319 129 ntBASIC4.66□□□□□ -1.66
SYCNQ0VAF6 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SYCNQ0VAF6 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SYCNQ0VAF6 AC097713.1-201ENST00000418025 562 ntTSL 4 BASIC4.66□□□□□ -1.66
SYCNQ0VAF6 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SYCNQ0VAF6 TAS2R2P-201ENST00000421146 910 ntBASIC4.66□□□□□ -1.66
SYCNQ0VAF6 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC4.66□□□□□ -1.66
SYCNQ0VAF6 GAS5-211ENST00000432536 959 ntTSL 2 BASIC4.66□□□□□ -1.66
SYCNQ0VAF6 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC4.66□□□□□ -1.66
SYCNQ0VAF6 SNX18P9-201ENST00000440580 835 ntBASIC4.66□□□□□ -1.66
SYCNQ0VAF6 AL161626.1-201ENST00000441480 490 ntBASIC4.66□□□□□ -1.66
SYCNQ0VAF6 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC4.66□□□□□ -1.66
SYCNQ0VAF6 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SYCNQ0VAF6 TAAR3P-201ENST00000466706 1078 ntBASIC4.66□□□□□ -1.66
SYCNQ0VAF6 PGBD4P1-201ENST00000473644 407 ntBASIC4.66□□□□□ -1.66
SYCNQ0VAF6 TAAR3P-202ENST00000481759 1025 ntBASIC4.66□□□□□ -1.66
SYCNQ0VAF6 RPS10P20-201ENST00000494130 463 ntBASIC4.66□□□□□ -1.66
SYCNQ0VAF6 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SYCNQ0VAF6 RN7SL445P-201ENST00000495609 293 ntBASIC4.66□□□□□ -1.66
SYCNQ0VAF6 HNRNPA1P17-201ENST00000496620 924 ntBASIC4.66□□□□□ -1.66
SYCNQ0VAF6 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC4.66□□□□□ -1.66
SYCNQ0VAF6 AC117383.2-201ENST00000514722 322 ntBASIC4.66□□□□□ -1.66
SYCNQ0VAF6 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC4.66□□□□□ -1.66
SYCNQ0VAF6 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms